Factsheet for PGSC0003DMT400048984

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

cytosol: 22313117
extracellular: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g041900.2.1	Tomato	extracellular	94.94	94.94
PGSC0003DMT400071690	Potato	vacuole	83.99	83.29
KRH02604	Soybean	vacuole	72.75	73.37
GSMUA_Achr9P16070_001	Banana	extracellular, golgi	50.84	73.28
GSMUA_AchrUn_...	Banana	nucleus, plastid, vacuole	19.38	72.63
VIT_11s0016g01070.t01	Wine grape	extracellular	73.6	72.38
CDX80173	Canola	endoplasmic reticulum	72.47	72.07
CDY09213	Canola	vacuole	72.47	71.87
CDY09216	Canola	vacuole	72.47	71.87
Bra020255.1-P	Field mustard	endoplasmic reticulum, vacuole	72.19	71.59
Bra002485.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	71.91	71.31
CDY31550	Canola	endoplasmic reticulum, extracellular, vacuole	71.91	71.31
AT3G45310.1	Thale cress	extracellular, vacuole	71.35	70.95
KRH12540	Soybean	extracellular	69.94	70.34
AT5G60360.3	Thale cress	endoplasmic reticulum, extracellular, vacuole	70.79	69.81
Zm00001d020636_P001	Maize	extracellular	70.51	69.72
KRG98609	Soybean	mitochondrion	58.15	69.46
EER96801	Sorghum	endoplasmic reticulum, vacuole	70.51	69.15
Zm00001d005828_P003	Maize	cytosol, nucleus, plastid	58.43	69.1
TraesCS5B01G208100.1	Wheat	vacuole	68.26	67.31
TraesCS5D01G216300.1	Wheat	unclear	68.26	67.31
HORVU5Hr1G061770.1	Barley	extracellular, golgi, vacuole	67.7	66.57
TraesCS5A01G210100.1	Wheat	unclear	67.42	65.75
GSMUA_Achr1P21910_001	Banana	plasma membrane	66.85	65.56
Os09t0442300-01	Rice	extracellular	68.26	65.5
KRH13188	Soybean	peroxisome	16.01	64.04
KRG99207	Soybean	cytosol, nucleus, plastid	47.75	63.67
CDY19784	Canola	cytosol, nucleus, plastid	40.17	59.58
KRH37496	Soybean	vacuole	67.42	59.11
Bra036565.1-P	Field mustard	extracellular	34.83	56.36
CDX71045	Canola	endoplasmic reticulum	46.35	45.58
CDX88753	Canola	vacuole	44.38	45.27
CDX71035	Canola	vacuole	43.26	44.9
PGSC0003DMT400079506	Potato	endoplasmic reticulum, extracellular, vacuole	39.33	38.04
PGSC0003DMT400009507	Potato	extracellular	37.64	36.91
CDX88755	Canola	extracellular, plasma membrane, vacuole	38.76	33.74
PGSC0003DMT400079777	Potato	extracellular	36.24	33.42
Bra006663.1-P	Field mustard	extracellular, plasma membrane, vacuole	31.46	32.56
PGSC0003DMT400026850	Potato	extracellular	20.51	29.55
Bra006666.1-P	Field mustard	vacuole	31.46	25.0

Protein Annotations

EntrezGene:102578939	MapMan:19.4.1.1	Gene3D:3.90.70.10	MEROPS:C01.163	GO:GO:0003674	GO:GO:0003824
GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008234	GO:GO:0016787
GO:GO:0019538	UniProt:M1BN40	PFAM:PF00112	PFAM:PF08246	EnsemblPlantsGene:PGSC0003DMG400019033	PGSC:PGSC0003DMG400019033
EnsemblPlants:PGSC0003DMT400048984	PRINTS:PR00705	ScanProsite:PS00139	ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411
PANTHER:PTHR12411:SF544	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS	InterPro:Pept_cys_AS	InterPro:Pept_his_AS	InterPro:Peptidase_C1A
InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848	SUPFAM:SSF54001	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0002958E4A	RefSeq:XP_006342382.1	SEG:seg	:	:

Description

Cysteine proteinase 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400019033]

Coordinates

chr7:-:38917150..38919469

Molecular Weight (calculated)

38755.2 Da

IEP (calculated)

6.876

GRAVY (calculated)

-0.066

Length

356 amino acids

Sequence
(BLAST)

001: MSSLSLLLVL VAGLFAAALA GPATFADENP IRQVVVSEEL ENGILQVVGQ TRNALSFARF AIRHRKRYES VEEIKQRFEI FLDNLKMIRS HNSKGLSYKL
101: GVNEFTDLTW DEFRRHKLGA SQNCSATTKG NLKLTNVVLP ETKDWREVGI VSPVKAQGKC GSCWTFSTTG ALEAAYAQAF GKGISLSEQQ LVDCAGAFNN
201: FGCNGGLPSQ AFEYIKFNGG LDTEEAYPYT GKNGICKFSQ ANIGVKVISS VNITLGAEDE LKYAVALVRP VSVAFEVVKG FKQYKSGVYT STECGDTPMD
301: VNHAVLAVGY GVENGVPYWL IKNSWGADWG EDGYFKMEMG KNMCGVATCA SYPIVA

Best Arabidopsis Sequence Match ( AT5G60360.1 )
(BLAST)

001: MSAKTILSSV VLVVLVAASA AANIGFDESN PIRMVSDGLR EVEESVSQIL GQSRHVLSFA RFTHRYGKKY QNVEEMKLRF SIFKENLDLI RSTNKKGLSY
101: KLGVNQFADL TWQEFQRTKL GAAQNCSATL KGSHKVTEAA LPETKDWRED GIVSPVKDQG GCGSCWTFST TGALEAAYHQ AFGKGISLSE QQLVDCAGAF
201: NNYGCNGGLP SQAFEYIKSN GGLDTEKAYP YTGKDETCKF SAENVGVQVL NSVNITLGAE DELKHAVGLV RPVSIAFEVI HSFRLYKSGV YTDSHCGSTP
301: MDVNHAVLAV GYGVEDGVPY WLIKNSWGAD WGDKGYFKME MGKNMCGIAT CASYPVVA

Arabidopsis Description

AALPAleurain-like protease [Source:UniProtKB/TrEMBL;Acc:A8MQZ1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.