Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 1
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P28800_001 | Banana | nucleus | 96.69 | 96.69 |
| GSMUA_Achr4P06440_001 | Banana | nucleus | 70.86 | 68.15 |
| GSMUA_Achr4P03790_001 | Banana | nucleus | 64.9 | 65.33 |
| GSMUA_Achr6P08660_001 | Banana | nucleus | 58.28 | 63.31 |
| GSMUA_Achr1P12710_001 | Banana | nucleus | 59.6 | 62.07 |
| GSMUA_Achr1P25340_001 | Banana | nucleus | 57.62 | 59.18 |
| GSMUA_Achr10P... | Banana | nucleus | 58.94 | 57.79 |
| GSMUA_Achr2P06540_001 | Banana | nucleus | 54.97 | 55.33 |
| GSMUA_Achr10P... | Banana | nucleus | 57.62 | 54.72 |
| GSMUA_Achr4P11290_001 | Banana | nucleus | 59.6 | 50.28 |
| GSMUA_Achr11P... | Banana | nucleus | 41.72 | 43.75 |
| GSMUA_Achr8P22330_001 | Banana | nucleus | 39.74 | 41.67 |
| GSMUA_Achr11P... | Banana | nucleus | 36.42 | 39.57 |
| GSMUA_Achr8P29960_001 | Banana | nucleus | 37.09 | 38.89 |
| GSMUA_Achr3P24300_001 | Banana | nucleus | 33.77 | 37.5 |
| GSMUA_Achr5P27130_001 | Banana | nucleus | 33.77 | 35.17 |
| GSMUA_Achr11P... | Banana | mitochondrion | 36.42 | 30.22 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr3G28710_001 |
| EnsemblPlants:GSMUA_Achr3P28710_001 | EnsemblPlants:GSMUA_Achr3T28710_001 | InterPro:IPR004827 | UniProt:M0SIN7 | PFAM:PF00170 | ScanProsite:PS00036 |
| PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF229 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI00029668CA |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
Putative Ocs element-binding factor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G28710_001]
Coordinates
chr3:-:28076606..28077061
Molecular Weight (calculated)
17195.8 Da
IEP (calculated)
10.618
GRAVY (calculated)
-0.511
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPVGTPSG SSLLQKSASE EDLQAVMNLK IQKRKISNRE SARRSRMRKQ KHLDGLTAQI GQLRKENSQI LTTFTLTTQR FFAVQAENSV LRTQMVELSN
101: RLQSLNDILH CLKAKYSISS GPMITDDYIN PWNLMRMNQP IMASAENMFQ Y
101: RLQSLNDILH CLKAKYSISS GPMITDDYIN PWNLMRMNQP IMASAENMFQ Y
001: MESSSSGTTS STIQTSSGSE ESLMEQRKRK RMLSNRESAR RSRMKKQKLL DDLTAQVNHL KKENTEIVTS VSITTQHYLT VEAENSVLRA QLDELNHRLQ
101: SLNDIIEFLD SSNNNNNNNM GMCSNPLVGL ECDDFFVNQM NMSYIMNQPL MASSDALMY
101: SLNDIIEFLD SSNNNNNNNM GMCSNPLVGL ECDDFFVNQM NMSYIMNQPL MASSDALMY
Arabidopsis Description
BZIP11bZIP transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:O65683]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.