Factsheet for GSMUA_Achr11P25310_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
nucleus 3
mitochondrion 3
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P27130_001	Banana	nucleus	38.46	48.28
GSMUA_Achr3P24300_001	Banana	nucleus	34.07	45.59
GSMUA_Achr8P22330_001	Banana	nucleus	34.62	43.75
GSMUA_Achr11P...	Banana	nucleus	34.62	43.75
Os05t0129300-02	Rice	nucleus	34.62	42.57
GSMUA_Achr11P...	Banana	nucleus	31.87	41.73
Zm00001d035440_P001	Maize	nucleus	30.22	40.74
TraesCS1D01G075500.1	Wheat	nucleus	32.97	40.0
TraesCS1B01G091500.1	Wheat	nucleus	32.97	40.0
Zm00001d030617_P001	Maize	nucleus	32.97	39.74
Zm00001d041604_P001	Maize	nucleus	32.97	39.47
GSMUA_Achr8P29960_001	Banana	nucleus	30.77	38.89
HORVU1Hr1G015660.1	Barley	nucleus	32.42	38.82
TraesCS5A01G088300.1	Wheat	nucleus	32.97	38.22
TraesCS5B01G094300.1	Wheat	nucleus	32.97	38.22
TraesCS5D01G100700.1	Wheat	nucleus	32.97	38.22
GSMUA_Achr6P08660_001	Banana	nucleus	29.12	38.13
HORVU5Hr1G023000.1	Barley	nucleus	32.97	37.97
HORVU2Hr1G021080.1	Barley	nucleus	32.97	37.97
EES16161	Sorghum	nucleus	32.42	37.58
GSMUA_Achr4P03790_001	Banana	nucleus	30.22	36.67
GSMUA_Achr3P28710_001	Banana	nucleus	30.22	36.42
GSMUA_Achr3P28800_001	Banana	nucleus	30.22	36.42
GSMUA_Achr4P06440_001	Banana	nucleus	31.32	36.31
EES17653	Sorghum	nucleus	28.57	35.37
GSMUA_Achr2P06540_001	Banana	nucleus	29.12	35.33
GSMUA_Achr10P...	Banana	nucleus	29.67	35.06
GSMUA_Achr1P12710_001	Banana	nucleus	27.47	34.48
GSMUA_Achr1P25340_001	Banana	nucleus	27.47	34.01
Zm00001d053988_P001	Maize	nucleus	29.67	33.33
GSMUA_Achr10P...	Banana	nucleus	27.47	31.45
Os02t0132500-01	Rice	nucleus	27.47	30.67
EES06238	Sorghum	plastid	28.57	30.41
Zm00001d044546_P001	Maize	nucleus, plastid	23.63	30.28
GSMUA_Achr4P11290_001	Banana	nucleus	29.67	30.17
Zm00001d015153_P001	Maize	nucleus, plastid	26.92	28.82
EES00878	Sorghum	nucleus, plastid	23.63	28.1
TraesCS6A01G096300.1	Wheat	nucleus, plastid	25.27	26.44
TraesCS6D01G087400.1	Wheat	nucleus, plastid	24.73	25.86
TraesCS6B01G124700.1	Wheat	nucleus, plastid	24.73	25.71
TraesCS3B01G226200.1	Wheat	nucleus, plastid	20.88	25.5
TraesCS3A01G200600.1	Wheat	nucleus, plastid	21.43	25.32
TraesCS3D01G203300.1	Wheat	nucleus, plastid	21.43	25.32
HORVU3Hr1G047180.1	Barley	nucleus, plastid	20.33	23.87
Os01t0542700-01	Rice	nucleus, plastid	23.63	23.63

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr11G25310_001	EnsemblPlants:GSMUA_Achr11P25310_001	EnsemblPlants:GSMUA_Achr11T25310_001	InterPro:IPR004827	UniProt:M0RVB1
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF167	SMART:SM00338
SUPFAM:SSF57959	TMHMM:TMhelix	UniParc:UPI0002967968	InterPro:bZIP	SEG:seg	:

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G25310_001]

Coordinates

chr11:-:24485372..24485920

Molecular Weight (calculated)

20509.3 Da

IEP (calculated)

11.035

GRAVY (calculated)

-0.007

Length

182 amino acids

Sequence
(BLAST)

001: MIRFLSRIPV RCPNGVWSVS IRAHSLSPIS TPLLLFVFYV VFLVACSLMM TQNPAAAERR QKRKLSNRES ARRSRMRKQQ RLEYLTSTVV QMRNEKTRMV
101: ALVAGVTQQR RLLESENSVL RAQAVEFAER LQSLSSVLRL VDDVRGAAME DVSEIPPPVP GLWQSPLPGV PILASADVFE CC

Best Arabidopsis Sequence Match ( AT3G62420.1 )
(BLAST)

001: MGSLQMQTSP ESDNDPRYAT VTDERKRKRM ISNRESARRS RMRKQKQLGD LINEVTLLKN DNAKITEQVD EASKKYIEME SKNNVLRAQA SELTDRLRSL
101: NSVLEMVEEI SGQALDIPEI PESMQNPWQM PCPMQPIRAS ADMFDC

Arabidopsis Description

BZIP53bZIP transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZP8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.