Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P03790_001 | Banana | nucleus | 71.94 | 66.67 |
| GSMUA_Achr1P12710_001 | Banana | nucleus | 66.91 | 64.14 |
| GSMUA_Achr1P25340_001 | Banana | nucleus | 64.03 | 60.54 |
| GSMUA_Achr4P06440_001 | Banana | nucleus | 67.63 | 59.87 |
| GSMUA_Achr3P28710_001 | Banana | nucleus | 63.31 | 58.28 |
| GSMUA_Achr2P06540_001 | Banana | nucleus | 61.87 | 57.33 |
| GSMUA_Achr3P28800_001 | Banana | nucleus | 61.87 | 56.95 |
| GSMUA_Achr10P... | Banana | nucleus | 63.31 | 55.35 |
| GSMUA_Achr10P... | Banana | nucleus | 61.15 | 55.19 |
| GSMUA_Achr4P11290_001 | Banana | nucleus | 61.87 | 48.04 |
| GSMUA_Achr11P... | Banana | nucleus | 45.32 | 43.75 |
| GSMUA_Achr8P29960_001 | Banana | nucleus | 44.6 | 43.06 |
| GSMUA_Achr8P22330_001 | Banana | nucleus | 43.88 | 42.36 |
| GSMUA_Achr11P... | Banana | nucleus | 39.57 | 39.57 |
| GSMUA_Achr3P24300_001 | Banana | nucleus | 33.81 | 34.56 |
| GSMUA_Achr5P27130_001 | Banana | nucleus | 35.25 | 33.79 |
| GSMUA_Achr11P... | Banana | mitochondrion | 38.13 | 29.12 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr6G08660_001 |
| EnsemblPlants:GSMUA_Achr6P08660_001 | EnsemblPlants:GSMUA_Achr6T08660_001 | InterPro:IPR004827 | UniProt:M0T5B5 | PFAM:PF00170 | ScanProsite:PS00036 |
| PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF229 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0002953AC5 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
Putative Ocs element-binding factor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G08660_001]
Coordinates
chr6:-:5749339..5749973
Molecular Weight (calculated)
15796.8 Da
IEP (calculated)
9.086
GRAVY (calculated)
-0.591
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPSGTSSG SSQLLTSGSE EDLQAVMDQK KRKRMISNRE SARRSRMRKQ KQLADLTAEV MRLRRENDQA VVALNLTTQS YSVVEAENSV LRAQAMELTY
101: RLQSLNEIVD NLNENSISPW NFLCMNRPIM ASAENMLYY
101: RLQSLNEIVD NLNENSISPW NFLCMNRPIM ASAENMLYY
001: MNNKTEMGSS TSGNCSSVST TGLANSGSES DLRQRDLIDE RKRKRKQSNR ESARRSRMRK QKHLDDLTAQ VTHLRKENAQ IVAGIAVTTQ HYVTIEAEND
101: ILRAQVLELN HRLQSLNEIV DFVESSSSGF GMETGQGLFD GGLFDGVMNP MNLGFYNQPI MASASTAGDV FNC
101: ILRAQVLELN HRLQSLNEIV DFVESSSSGF GMETGQGLFD GGLFDGVMNP MNLGFYNQPI MASASTAGDV FNC
Arabidopsis Description
BZIP44bZIP transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:C0Z2L5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.