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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • plastid 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G023000.1 Barley nucleus 100.0 100.0
TraesCS5A01G088300.1 Wheat nucleus 98.73 99.36
TraesCS5B01G094300.1 Wheat nucleus 98.73 99.36
TraesCS5D01G100700.1 Wheat nucleus 98.73 99.36
Zm00001d030617_P001 Maize nucleus 80.38 84.11
EES16161 Sorghum nucleus 81.65 82.17
Zm00001d041604_P001 Maize nucleus 77.85 80.92
GSMUA_Achr5P27130_001 Banana nucleus 45.57 49.66
HORVU1Hr1G015660.1 Barley nucleus 46.2 48.03
GSMUA_Achr3P24300_001 Banana nucleus 36.71 42.65
GSMUA_Achr11P... Banana mitochondrion 37.97 32.97
HORVU3Hr1G047180.1 Barley nucleus, plastid 29.75 30.32
HORVU5Hr1G054510.1 Barley nucleus 28.48 29.22
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1EMBL:AK372715ncoils:CoilUniProt:F2E990GO:GO:0003674
GO:GO:0003700GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987EnsemblPlantsGene:HORVU2Hr1G021080EnsemblPlants:HORVU2Hr1G021080.1InterPro:IPR004827PFAM:PF00170ScanProsite:PS00036
PFscan:PS50217PANTHER:PTHR22952PANTHER:PTHR22952:SF126SMART:SM00338SUPFAM:SSF57959UniParc:UPI00020081D0
InterPro:bZIPSEG:seg::::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E990]
Coordinates
chrchr2H:-:59171718..59173184
Molecular Weight (calculated)
17455.6 Da
IEP (calculated)
9.247
GRAVY (calculated)
-0.616
Length
158 amino acids
Sequence
(BLAST)
001: MSSSSLSPGG GGRLSGSDGD SGATFAAGDN RREKRRLSNR ESARRSRLRK QQHLDELVQE VARLKAENAR VLARANDITG QFVRVDQENT VLRARAAELG
101: DRLRSVNQVL RVVEEFSGVA MDIQEECPPD DPLLRPWQIP YPATAMPIAA TATHMLQY
Best Arabidopsis Sequence Match ( AT3G62420.1 )
(BLAST)
001: MGSLQMQTSP ESDNDPRYAT VTDERKRKRM ISNRESARRS RMRKQKQLGD LINEVTLLKN DNAKITEQVD EASKKYIEME SKNNVLRAQA SELTDRLRSL
101: NSVLEMVEEI SGQALDIPEI PESMQNPWQM PCPMQPIRAS ADMFDC
Arabidopsis Description
BZIP53bZIP transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZP8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.