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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 4
  • nucleus 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G200600.1 Wheat nucleus, plastid 84.52 85.06
TraesCS3B01G226200.1 Wheat nucleus, plastid 81.29 84.56
TraesCS3D01G203300.1 Wheat nucleus, plastid 83.23 83.77
EES00878 Sorghum nucleus, plastid 56.77 57.52
Zm00001d044546_P001 Maize nucleus, plastid 49.68 54.23
Os01t0542700-01 Rice nucleus, plastid 52.9 45.05
HORVU1Hr1G015660.1 Barley nucleus 31.61 32.24
HORVU2Hr1G021080.1 Barley nucleus 30.32 29.75
HORVU5Hr1G023000.1 Barley nucleus 30.32 29.75
HORVU5Hr1G054510.1 Barley nucleus 28.39 28.57
GSMUA_Achr5P27130_001 Banana nucleus 25.16 26.9
GSMUA_Achr3P24300_001 Banana nucleus 21.94 25.0
GSMUA_Achr11P... Banana mitochondrion 23.87 20.33
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1UniProt:A0A287KYJ2GO:GO:0003674GO:GO:0003700GO:GO:0006139
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:HORVU3Hr1G047180
EnsemblPlants:HORVU3Hr1G047180.1InterPro:IPR004827PFAM:PF00170ScanProsite:PS00036PFscan:PS50217PANTHER:PTHR22952
PANTHER:PTHR22952:SF120SMART:SM00338SUPFAM:SSF57959UniParc:UPI000B46EA5DInterPro:bZIPSEG:seg
Description
No Description!
Coordinates
chrchr3H:+:319541939..319544354
Molecular Weight (calculated)
16397.3 Da
IEP (calculated)
8.468
GRAVY (calculated)
-0.317
Length
155 amino acids
Sequence
(BLAST)
001: MASPGPGAAS TVMSSSAGSE ATRAPSAGLM EERKRKRKES NRLSAQRSRA RKLLQVDELE AEAAALGAKN SAVAAKAREA ARRCAVVQAE NELLHARALE
101: LGARLESLAE FIQYMDAAAD SGASSSPFAG VSGTALLQQP LLQTDLYCNC NYTYY
Best Arabidopsis Sequence Match ( AT1G75390.1 )
(BLAST)
001: MNNKTEMGSS TSGNCSSVST TGLANSGSES DLRQRDLIDE RKRKRKQSNR ESARRSRMRK QKHLDDLTAQ VTHLRKENAQ IVAGIAVTTQ HYVTIEAEND
101: ILRAQVLELN HRLQSLNEIV DFVESSSSGF GMETGQGLFD GGLFDGVMNP MNLGFYNQPI MASASTAGDV FNC
Arabidopsis Description
BZIP44bZIP transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:C0Z2L5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.