Factsheet for TraesCS3A01G200600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 5
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G203300.1	Wheat	nucleus, plastid	96.75	96.75
TraesCS3B01G226200.1	Wheat	nucleus, plastid	92.86	95.97
HORVU3Hr1G047180.1	Barley	nucleus, plastid	85.06	84.52
EES00878	Sorghum	nucleus, plastid	60.39	60.78
Zm00001d044546_P001	Maize	nucleus, plastid	50.65	54.93
Os01t0542700-01	Rice	nucleus, plastid	54.55	46.15
TraesCS5A01G088300.1	Wheat	nucleus	30.52	29.94
TraesCS6A01G096300.1	Wheat	nucleus, plastid	33.77	29.89
TraesCS5A01G179000.1	Wheat	nucleus	27.92	27.92
GSMUA_Achr3P24300_001	Banana	nucleus	22.73	25.74
GSMUA_Achr5P27130_001	Banana	nucleus	23.38	24.83
GSMUA_Achr11P...	Banana	mitochondrion	25.32	21.43

Protein Annotations

EnsemblPlants:TraesCS3A01G200600.1	EnsemblPlantsGene:TraesCS3A01G200600	Gene3D:1.20.5.170	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
InterPro:bZIP	ncoils:Coil	PANTHER:PTHR22952	PANTHER:PTHR22952:SF120	PFAM:PF00170	PFscan:PS50217
ScanProsite:PS00036	SEG:seg	SMART:SM00338	SUPFAM:SSF57959	MapMan:15.5.4.1	:

Description

No Description!

Coordinates

chr3A:-:332219515..332219979

Molecular Weight (calculated)

16303.3 Da

IEP (calculated)

7.918

GRAVY (calculated)

-0.268

Length

154 amino acids

Sequence
(BLAST)

001: MASPGPGTAS TVTSSSAGSE ATRAPPAALT EERNRKRKES NRLSAQRSRA RKLLQVDELE AEAAALRARN CAVAAAAQEA ARRCAVVQAE NELLHARALE
101: LGARLESLAE LIQYMDAAAA MGASSIPLAG VNGNALPQQP ILQTELYCNY SYYC

Best Arabidopsis Sequence Match ( AT1G75390.1 )
(BLAST)

001: MNNKTEMGSS TSGNCSSVST TGLANSGSES DLRQRDLIDE RKRKRKQSNR ESARRSRMRK QKHLDDLTAQ VTHLRKENAQ IVAGIAVTTQ HYVTIEAEND
101: ILRAQVLELN HRLQSLNEIV DFVESSSSGF GMETGQGLFD GGLFDGVMNP MNLGFYNQPI MASASTAGDV FNC

Arabidopsis Description

BZIP44bZIP transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:C0Z2L5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.