Factsheet for TraesCS6A01G096300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G087400.1	Wheat	nucleus, plastid	95.98	95.98
TraesCS6B01G124700.1	Wheat	nucleus, plastid	95.98	95.43
Zm00001d015153_P001	Maize	nucleus, plastid	74.71	76.47
Os02t0132500-01	Rice	nucleus	71.26	76.07
EES06238	Sorghum	plastid	73.56	74.85
Zm00001d053988_P001	Maize	nucleus	69.54	74.69
TraesCS5A01G179000.1	Wheat	nucleus	31.03	35.06
GSMUA_Achr3P24300_001	Banana	nucleus	26.44	33.82
TraesCS3A01G200600.1	Wheat	nucleus, plastid	29.89	33.77
TraesCS5A01G088300.1	Wheat	nucleus	29.89	33.12
GSMUA_Achr5P27130_001	Banana	nucleus	25.29	30.34
GSMUA_Achr11P...	Banana	mitochondrion	26.44	25.27

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF243	SMART:SM00338
SUPFAM:SSF57959	EnsemblPlantsGene:TraesCS6A01G096300	EnsemblPlants:TraesCS6A01G096300.1	InterPro:bZIP	TIGR:cd14702	SEG:seg

Description

No Description!

Coordinates

chr6A:-:63609831..63610355

Molecular Weight (calculated)

18259.6 Da

IEP (calculated)

8.547

GRAVY (calculated)

-0.115

Length

174 amino acids

Sequence
(BLAST)

001: MASSSGSGST GSLSTAAAMA MAAASGTEEE MRALMEQRRA KRMLSNRESA RRSRMRKQRH LDDLAAQAAH LRRENAHVAA ALGLTARGLQ AVDAENAVLR
101: TQAAELAARL HSLNDIIACM SASNNTAAAV ALTVAAAATA TTTDPFLGGF DGASLDDYLF RSSPEMFMFP ALQS

Best Arabidopsis Sequence Match ( AT4G34590.1 )
(BLAST)

001: MESSSSGTTS STIQTSSGSE ESLMEQRKRK RMLSNRESAR RSRMKKQKLL DDLTAQVNHL KKENTEIVTS VSITTQHYLT VEAENSVLRA QLDELNHRLQ
101: SLNDIIEFLD SSNNNNNNNM GMCSNPLVGL ECDDFFVNQM NMSYIMNQPL MASSDALMY

Arabidopsis Description

BZIP11bZIP transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:O65683]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.