CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 5
plastid 4
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015153_P001	Maize	nucleus, plastid	92.4	92.94
Zm00001d053988_P001	Maize	nucleus	81.29	85.8
Os02t0132500-01	Rice	nucleus	74.27	77.91
TraesCS6A01G096300.1	Wheat	nucleus, plastid	74.85	73.56
TraesCS6B01G124700.1	Wheat	nucleus, plastid	73.68	72.0
TraesCS6D01G087400.1	Wheat	nucleus, plastid	73.1	71.84
EER96530	Sorghum	nucleus	35.67	38.36
EES16161	Sorghum	nucleus	33.33	36.31
GSMUA_Achr3P24300_001	Banana	nucleus	28.66	36.03
EES00878	Sorghum	nucleus, plastid	30.99	34.64
EES14897	Sorghum	nucleus, plastid	35.09	34.09
GSMUA_Achr5P27130_001	Banana	nucleus	28.07	33.1
EES17653	Sorghum	nucleus	26.9	31.29
GSMUA_Achr11P...	Banana	mitochondrion	30.41	28.57

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EntrezGene:8057516	UniProt:C5XTV6	ncoils:Coil	EnsemblPlants:EES06238
ProteinID:EES06238	ProteinID:EES06238.1	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	PFAM:PF00170
ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF243	SMART:SM00338	EnsemblPlantsGene:SORBI_3004G031100
SUPFAM:SSF57959	unigene:Sbi.4432	UniParc:UPI0001A85FF1	RefSeq:XP_002453262.1	InterPro:bZIP	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:2492697..2493212

Molecular Weight (calculated)

17732.0 Da

IEP (calculated)

7.444

GRAVY (calculated)

-0.044

Length

171 amino acids

Sequence
(BLAST)

001: MASSSGSGSS GSLSAATAAL AAAAGTEEEL RALMEQRRAK RMLSNRESAR RSRMRKQRHL DELTAQAAHL RRENAHVATA LGLTTQGLLA VDAENAVLRT
101: QAAELAARLG SLNDILACMN TNAAAAVGAV AVSVSLTAAA ASSSDPYLAF DGATALDDLL RSCPENMYQL C

Best Arabidopsis Sequence Match ( AT4G34590.1 )
(BLAST)

001: MESSSSGTTS STIQTSSGSE ESLMEQRKRK RMLSNRESAR RSRMKKQKLL DDLTAQVNHL KKENTEIVTS VSITTQHYLT VEAENSVLRA QLDELNHRLQ
101: SLNDIIEFLD SSNNNNNNNM GMCSNPLVGL ECDDFFVNQM NMSYIMNQPL MASSDALMY

Arabidopsis Description

BZIP11bZIP transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:O65683]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.