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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • plastid 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G075500.1 Wheat nucleus 97.37 98.67
TraesCS1B01G091500.1 Wheat nucleus 96.71 98.0
Os05t0129300-02 Rice nucleus 81.58 83.78
Zm00001d035440_P001 Maize nucleus 62.5 70.37
EES17653 Sorghum nucleus 63.82 65.99
HORVU2Hr1G021080.1 Barley nucleus 48.03 46.2
HORVU5Hr1G023000.1 Barley nucleus 48.03 46.2
GSMUA_Achr5P27130_001 Banana nucleus 40.13 42.07
GSMUA_Achr3P24300_001 Banana nucleus 34.21 38.24
GSMUA_Achr11P... Banana mitochondrion 38.82 32.42
HORVU3Hr1G047180.1 Barley nucleus, plastid 32.24 31.61
HORVU5Hr1G054510.1 Barley nucleus 28.29 27.92
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1EMBL:AK361449ncoils:CoilUniProt:F2DC34GO:GO:0003674
GO:GO:0003700GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:HORVU1Hr1G015660
EnsemblPlants:HORVU1Hr1G015660.1InterPro:IPR004827PFAM:PF07716ScanProsite:PS00036PFscan:PS50217PANTHER:PTHR22952
PANTHER:PTHR22952:SF361SMART:SM00338SUPFAM:SSF57959UniParc:UPI0002005D2CInterPro:bZIPSEG:seg
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DC34]
Coordinates
chrchr1H:-:47002240..47004177
Molecular Weight (calculated)
16340.2 Da
IEP (calculated)
9.997
GRAVY (calculated)
-0.618
Length
152 amino acids
Sequence
(BLAST)
001: MSSPSRRSSS PESNIDGGSG SGSGSAGDER KRKRMLSNRE SARRSRARKQ QRMEELIAEA SRLQAENARV EAQIGAYTTE LTKVDGENAV LRARHGELAG
101: RLQALGGVLE IFQVAGAPVD IPEIPDPLLR PWQSPFAPQL ATAGGVPDAF QF
Best Arabidopsis Sequence Match ( AT3G62420.1 )
(BLAST)
001: MGSLQMQTSP ESDNDPRYAT VTDERKRKRM ISNRESARRS RMRKQKQLGD LINEVTLLKN DNAKITEQVD EASKKYIEME SKNNVLRAQA SELTDRLRSL
101: NSVLEMVEEI SGQALDIPEI PESMQNPWQM PCPMQPIRAS ADMFDC
Arabidopsis Description
BZIP53bZIP transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZP8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.