Factsheet for Os05t0129300-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G075500.1	Wheat	nucleus	85.14	84.0
TraesCS1B01G091500.1	Wheat	nucleus	84.46	83.33
HORVU1Hr1G015660.1	Barley	nucleus	83.78	81.58
Zm00001d035440_P001	Maize	nucleus	68.24	74.81
EES17653	Sorghum	nucleus	70.27	70.75
GSMUA_Achr5P27130_001	Banana	nucleus	44.59	45.52
GSMUA_Achr3P24300_001	Banana	nucleus	38.51	41.91
GSMUA_Achr11P...	Banana	mitochondrion	42.57	34.62
Os09t0306400-01	Rice	nucleus	31.76	30.72
Os02t0132500-01	Rice	nucleus	33.78	30.67
Os01t0542700-01	Rice	nucleus, plastid	34.46	28.02
Os08t0357300-01	Rice	cytosol	14.19	18.58

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EntrezGene:4337699	ProteinID:AAU10749.1	EMBL:AK065180	EMBL:AK104844
EMBL:AK105138	ProteinID:BAF16458.1	ProteinID:BAS92102.1	ncoils:Coil	ProteinID:EEE62206.1	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0006950	GO:GO:0006971	GO:GO:0007154	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009267	GO:GO:0009605	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987
GO:GO:0009991	GO:GO:0043565	GO:GO:0045893	GO:GO:0046982	GO:GO:2000693	EMBL:HQ858806
InterPro:IPR004827	EnsemblPlantsGene:Os05g0129300	EnsemblPlants:Os05t0129300-02	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217
PANTHER:PTHR22952	PANTHER:PTHR22952:SF361	UniProt:Q688Q7	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000009E21A
RefSeq:XP_015639544.1	InterPro:bZIP	SEG:seg	:	:	:

Description

LOW-TEMPERATURE-INDUCED PROTEIN 19Basic/leucine zipper protein. (Os05t0129300-02)

Coordinates

chr5:+:1717710..1719083

Molecular Weight (calculated)

15955.9 Da

IEP (calculated)

9.997

GRAVY (calculated)

-0.546

Length

148 amino acids

Sequence
(BLAST)

001: MSSPSRRSSS PESNTSGGGG GADERKRKRM LSNRESARRS RARKQQRLEE LIAEAARLQA ENARVEAQIG AYAGELSKVD GENAVLRARH GELAGRLQAL
101: GSVLEILQVA GAPVDIPEIP DDPLLRPWQP PFAAQPIVAT AMADAFQF

Best Arabidopsis Sequence Match ( AT3G62420.1 )
(BLAST)

001: MGSLQMQTSP ESDNDPRYAT VTDERKRKRM ISNRESARRS RMRKQKQLGD LINEVTLLKN DNAKITEQVD EASKKYIEME SKNNVLRAQA SELTDRLRSL
101: NSVLEMVEEI SGQALDIPEI PESMQNPWQM PCPMQPIRAS ADMFDC

Arabidopsis Description

BZIP53bZIP transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZP8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.