Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P09460_001 | Banana | cytosol | 36.26 | 38.27 |
| GSMUA_Achr4P03390_001 | Banana | extracellular | 47.08 | 38.06 |
| GSMUA_Achr6P30360_001 | Banana | cytosol, plastid | 33.92 | 31.35 |
| GSMUA_Achr6P30400_001 | Banana | cytosol, plastid | 33.92 | 31.35 |
Protein Annotations
| MapMan:13.3.5.5.2 | Gene3D:2.130.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr4G10920_001 |
| EnsemblPlants:GSMUA_Achr4P10920_001 | EnsemblPlants:GSMUA_Achr4T10920_001 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | UniProt:M0SMV9 |
| PFAM:PF00400 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR10971 | PANTHER:PTHR10971:SF24 | SMART:SM00320 |
| SUPFAM:SSF50978 | UniParc:UPI0002956CF7 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
Mitotic checkpoint protein BUB3 [Source:GMGC_GENE;Acc:GSMUA_Achr4G10920_001]
Coordinates
chr4:+:7888960..7899322
Molecular Weight (calculated)
37664.1 Da
IEP (calculated)
7.518
GRAVY (calculated)
-0.415
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAATLPATG GRELSDPPSD GISNLRFSNH SDLLLVSSWD RSLRLYDAGA DALKGEFAHV GPVLDCCFHD DSSGFSACAD HMVRRFVFGS GKEDILGRHD
101: APVRCVEYSY ATGQVITGSW DKTLKCWDPR GASGPDHALV GTYPQPERVY SLSLVGHRLV VATAGRHVNV YDLRNMSQPE QRRESSLKYQ TRCVRCYPNG
201: TGFALSSVEG RVAMEFFDLS EAAQAKKYAF KCHRKSEAGR DTVYPVNAIA FHPIYGTFAT GGCDGYVNVW DGNNKKRLYQ YSKYPTSIAA LSFSRDGRQL
301: AVASSYTFEE GDTLHEPDTI FVRNVNEVEV KPKPKALPAP PP
101: APVRCVEYSY ATGQVITGSW DKTLKCWDPR GASGPDHALV GTYPQPERVY SLSLVGHRLV VATAGRHVNV YDLRNMSQPE QRRESSLKYQ TRCVRCYPNG
201: TGFALSSVEG RVAMEFFDLS EAAQAKKYAF KCHRKSEAGR DTVYPVNAIA FHPIYGTFAT GGCDGYVNVW DGNNKKRLYQ YSKYPTSIAA LSFSRDGRQL
301: AVASSYTFEE GDTLHEPDTI FVRNVNEVEV KPKPKALPAP PP
001: MTTVTPSAGR ELSNPPSDGI SNLRFSNNSD HLLVSSWDKR VRLYDVSTNS LKGEFLHGGA VLDCCFHDDF SGFSVGADYK VRRIVFNVGK EDILGTHDKA
101: VRCVEYSYAA GQVITGSWDK TVKCWDPRGA SGPERTQVGT YLQPERVYSM SLVGHRLVVA TAGRHVNIYD LRNMSQPEQR RESSLKYQTR CVRCYPNGTG
201: YALSSVEGRV AMEFFDLSEA AQAKKYAFKC HRKSEAGRDI VYPVNSIAFH PIYGTFATGG CDGFVNIWDG NNKKRLYQYS KYPTSISALS FSRDGQLLAV
301: ASSYTFEEGE KSQEPEAIFV RSVNEIEVKP KPKVYPNPAA
101: VRCVEYSYAA GQVITGSWDK TVKCWDPRGA SGPERTQVGT YLQPERVYSM SLVGHRLVVA TAGRHVNIYD LRNMSQPEQR RESSLKYQTR CVRCYPNGTG
201: YALSSVEGRV AMEFFDLSEA AQAKKYAFKC HRKSEAGRDI VYPVNSIAFH PIYGTFATGG CDGFVNIWDG NNKKRLYQYS KYPTSISALS FSRDGQLLAV
301: ASSYTFEEGE KSQEPEAIFV RSVNEIEVKP KPKVYPNPAA
Arabidopsis Description
BUB3.1BUB3.1 [Source:UniProtKB/TrEMBL;Acc:A0A178VA46]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.