Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P10920_001 | Banana | cytosol | 38.06 | 47.08 |
| TraesCS4B01G246100.1 | Wheat | cytosol | 33.81 | 46.58 |
| CDY59371 | Canola | cytosol, plastid | 36.41 | 45.43 |
| KRH35682 | Soybean | nucleus | 36.41 | 45.29 |
| CDY03579 | Canola | cytosol, plastid | 36.41 | 45.29 |
| VIT_03s0091g00710.t01 | Wine grape | cytosol | 35.93 | 45.1 |
| KRG91104 | Soybean | nucleus | 36.64 | 45.06 |
| Bra014226.1-P | Field mustard | cytosol, plastid | 35.93 | 44.84 |
| AT1G49910.1 | Thale cress | cytosol | 35.93 | 44.84 |
| KRG91092 | Soybean | nucleus | 35.93 | 44.71 |
| EER87819 | Sorghum | cytosol | 35.93 | 44.31 |
| Solyc01g107160.2.1 | Tomato | nucleus | 35.46 | 44.12 |
| Bra038220.1-P | Field mustard | cytosol, plastid | 35.22 | 43.82 |
| CDY42193 | Canola | cytosol, plastid | 35.22 | 43.82 |
| CDX95434 | Canola | cytosol, plastid | 35.22 | 43.82 |
| PGSC0003DMT400066160 | Potato | extracellular | 35.22 | 43.82 |
| Os03t0448600-01 | Rice | cytosol | 35.46 | 43.73 |
| AT3G19590.1 | Thale cress | cytosol | 34.99 | 43.53 |
| TraesCS4A01G058600.1 | Wheat | cytosol, plastid | 34.75 | 42.61 |
| TraesCS4D01G245500.2 | Wheat | cytosol, plastid | 34.52 | 42.32 |
| KRH35672 | Soybean | cytosol | 12.06 | 38.93 |
| Os07t0588500-00 | Rice | cytosol | 32.86 | 38.19 |
| HORVU4Hr1G067810.1 | Barley | plastid | 34.75 | 36.75 |
| TraesCS2A01G194000.1 | Wheat | cytosol | 29.55 | 36.13 |
| TraesCS2D01G193800.1 | Wheat | cytosol | 29.08 | 35.96 |
| TraesCS2B01G212800.1 | Wheat | cytosol | 29.31 | 35.73 |
| GSMUA_Achr9P09460_001 | Banana | cytosol | 19.39 | 25.31 |
| GSMUA_Achr6P30400_001 | Banana | cytosol, plastid | 15.37 | 17.57 |
| GSMUA_Achr6P30360_001 | Banana | cytosol, plastid | 15.13 | 17.3 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P03390_001 | EnsemblPlants:GSMUA_Achr4T03390_001 | EnsemblPlantsGene:GSMUA_Achr4G03390_001 | Gene3D:2.130.10.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf |
| PANTHER:PTHR10971 | PANTHER:PTHR10971:SF24 | PFAM:PF00400 | SEG:seg | SignalP:SignalP-TM | SMART:SM00320 |
| SUPFAM:SSF50978 | TMHMM:TMhelix | UniParc:UPI0002968693 | UniProt:M0SKQ6 | MapMan:35.1 | : |
Description
Putative Mitotic checkpoint protein BUB3 [Source:GMGC_GENE;Acc:GSMUA_Achr4G03390_001]
Coordinates
chr4:+:2705808..2713360
Molecular Weight (calculated)
47549.0 Da
IEP (calculated)
6.998
GRAVY (calculated)
0.022
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSLRFFAMG WIAGAVLAFF IPSSISISIA AGSASTDEGG TTAMPMHGGR VKTVITHRKL EVCDMWLEHC LQLTMEHARN FSSGTDEMIH DSQQITDSST
101: ACLSGPPSDG ISNLRFSNHS DLLLVSSWDK SLRLYDAGAN VLEGEFVHAG PVLDCCFHDD SAGFSACADH TVRRCLYSGG LYPVMVLNHG KLPCLNHAFA
201: KALYIELLFL LYFSRHYLTI SVNCMAFHCL MEICYCGHFQ RDLQSISLPL CGEANLTCNL NTFFYILYRL YDFRLLSFSR HHRNLERVLY PSSIYGVCQS
301: INFSFYREYL VLNRSLCLLE CNWKMHNVVM SSEKPPVTRI CYGTFATGGC DGYVNLWDGN NKKRLYQYSK YPTSIAALSF SRDGHLLAVA SSYTFEEADT
401: LHEPDAIFVR NVNEVEVKPK PKA
101: ACLSGPPSDG ISNLRFSNHS DLLLVSSWDK SLRLYDAGAN VLEGEFVHAG PVLDCCFHDD SAGFSACADH TVRRCLYSGG LYPVMVLNHG KLPCLNHAFA
201: KALYIELLFL LYFSRHYLTI SVNCMAFHCL MEICYCGHFQ RDLQSISLPL CGEANLTCNL NTFFYILYRL YDFRLLSFSR HHRNLERVLY PSSIYGVCQS
301: INFSFYREYL VLNRSLCLLE CNWKMHNVVM SSEKPPVTRI CYGTFATGGC DGYVNLWDGN NKKRLYQYSK YPTSIAALSF SRDGHLLAVA SSYTFEEADT
401: LHEPDAIFVR NVNEVEVKPK PKA
001: MTLVPAIGRE LSNPPSDGIS NLRFSNNSDH LLVSSWDKSV RLYDANGDLM RGEFKHGGAV LDCCFHDDSS GFSVCADTKV RRIDFNAGKE DVLGTHEKPV
101: RCVEYSYAAG QVITGSWDKT IKCWDPRGAS GTERTQIGTY MQPERVNSLS LVGNRLVVAT AGRHVNIYDL RNMSQPEQRR ESSLKYQTRC VRCYPNGTGY
201: ALSSVEGRVS MEFFDLSEAA QAKKYAFKCH RKSEDGRDIV YPVNAIAFHP IYGTFASGGC DGFVNIWDGN NKKRLYQYSK YPTSIAALSF SRDGGLLAVA
301: SSYTFEEGDK PHEPDAIFVR SVNEIEVKPK PKVYPNPPV
101: RCVEYSYAAG QVITGSWDKT IKCWDPRGAS GTERTQIGTY MQPERVNSLS LVGNRLVVAT AGRHVNIYDL RNMSQPEQRR ESSLKYQTRC VRCYPNGTGY
201: ALSSVEGRVS MEFFDLSEAA QAKKYAFKCH RKSEDGRDIV YPVNAIAFHP IYGTFASGGC DGFVNIWDGN NKKRLYQYSK YPTSIAALSF SRDGGLLAVA
301: SSYTFEEGDK PHEPDAIFVR SVNEIEVKPK PKVYPNPPV
Arabidopsis Description
BUB3.2BUB3.2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7L6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.