Factsheet for GSMUA_Achr5P11340_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P02510_001
GSMUA_Achr4P03390_001	nucleus
GSMUA_Achr4P11860_001
GSMUA_Achr5P10040_001
GSMUA_Achr5P11340_001
GSMUA_Achr5P14270_001	nucleus
GSMUA_Achr6P21190_001	nucleus
GSMUA_Achr9P23800_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51600.1	GSMUA_Achr4P11860_001	AT2G22640.1	25262777
AT5G51600.1	GSMUA_Achr9P23800_001	AT2G22640.1	25262777
AT5G51600.1	GSMUA_Achr4P03390_001	AT3G19590.1	25262777
AT5G51600.1	GSMUA_Achr4P03390_001	AT3G19590.1	25262777
AT5G51600.1	GSMUA_Achr6P21190_001	AT3G25980.1	25262777
AT5G51600.1	GSMUA_Achr6P21190_001	AT3G25980.1	25262777
AT5G51600.1	GSMUA_Achr5P14270_001	AT5G05510.1	25262777
AT5G51600.1	GSMUA_Achr5P14270_001	AT5G05510.1	25262777
AT5G51600.1	GSMUA_Achr1P02510_001	AT5G51600.1	25262777
AT5G51600.1	GSMUA_Achr5P10040_001	AT5G51600.1	25262777
AT5G51600.1	GSMUA_Achr5P11340_001	AT5G51600.1	25262777

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P02510_001	Banana	cytosol	80.66	79.7
Zm00001d030420_P001	Maize	cytosol	22.79	66.38
GSMUA_Achr5P10040_001	Banana	nucleus	61.77	64.98
TraesCS3A01G264600.1	Wheat	cytosol	66.72	64.59
TraesCS3D01G264700.2	Wheat	cytosol	66.57	64.35
TraesCS3B01G297900.1	Wheat	cytosol	66.42	64.2
Zm00001d011615_P001	Maize	cytosol, nucleus, plastid	66.57	62.98
TraesCS1A01G378900.1	Wheat	cytosol	63.57	62.63
OQU87349	Sorghum	golgi, vacuole	66.57	62.1
VIT_16s0022g01820.t01	Wine grape	nucleus	67.92	62.05
TraesCS1D01G386100.1	Wheat	cytosol	63.27	61.97
TraesCS1B01G400200.1	Wheat	cytosol	62.82	61.53
HORVU1Hr1G083810.7	Barley	cytosol	61.77	60.23
Zm00001d043831_P001	Maize	cytosol, mitochondrion	65.97	59.95
HORVU3Hr1G063620.1	Barley	plastid	66.12	59.12
VIT_15s0048g00860.t01	Wine grape	cytosol, nucleus, plasma membrane	52.77	58.76
KRG92454	Soybean	nucleus	63.42	58.18
KRH34346	Soybean	cytosol	64.47	57.72
KRH38719	Soybean	cytosol	55.32	57.3
Os05t0552900-01	Rice	cytosol	62.52	57.05
Solyc03g007130.2.1	Tomato	nucleus	63.27	56.95
PGSC0003DMT400079660	Potato	cytosol	63.57	56.91
AT5G51600.1	Thale cress	cytosol	59.37	56.01
PGSC0003DMT400070431	Potato	nucleus	57.72	55.48
Bra028266.1-P	Field mustard	cytosol	58.47	55.16
Bra023930.1-P	Field mustard	cytosol	58.62	55.15
Bra010069.1-P	Field mustard	nucleus	44.23	54.73
CDX86911	Canola	nucleus	44.23	54.73
CDY00270	Canola	nucleus	44.23	54.73
CDX87240	Canola	nucleus	44.08	54.34
Bra035900.1-P	Field mustard	nucleus	43.63	53.79
CDY16786	Canola	nucleus	43.63	53.59
AT5G62250.1	Thale cress	nucleus	43.78	53.19
Solyc11g072280.1.1	Tomato	extracellular	60.42	52.27
GSMUA_Achr4P19380_001	Banana	cytosol	43.03	48.98
GSMUA_Achr3P13450_001	Banana	cytosol	43.03	48.73
GSMUA_Achr7P06200_001	Banana	cytosol	42.43	48.13
GSMUA_Achr4P03890_001	Banana	cytosol	41.68	47.44
Zm00001d006888_P001	Maize	cytosol	18.89	47.19
PGSC0003DMT400033224	Potato	nucleus	52.17	46.09
Solyc01g091380.2.1	Tomato	plastid	51.12	45.83
AT3G60840.1	Thale cress	cytosol	45.28	44.61
Bra014467.1-P	Field mustard	cytosol	43.33	44.6
CDY62713	Canola	cytosol	45.73	44.59
KRH09228	Soybean	cytosol	35.68	44.49
KRH40591	Soybean	nucleus	46.48	44.22
CDX89081	Canola	cytosol	45.28	44.02
GSMUA_Achr6P23030_001	Banana	cytosol	37.03	43.95
GSMUA_Achr9P17360_001	Banana	cytosol	37.78	43.37
GSMUA_Achr10P...	Banana	nucleus	37.78	41.72
GSMUA_Achr11P...	Banana	nucleus	35.68	41.39
GSMUA_Achr6P05980_001	Banana	cytosol	36.28	40.67
GSMUA_Achr6P04350_001	Banana	cytosol	38.38	40.63
Zm00001d046884_P001	Maize	plastid	24.44	33.96
GSMUA_Achr2P21660_001	Banana	endoplasmic reticulum, extracellular	38.53	27.11

Protein Annotations

EnsemblPlants:GSMUA_Achr5P11340_001	EnsemblPlants:GSMUA_Achr5T11340_001	EnsemblPlantsGene:GSMUA_Achr5G11340_001	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0000910
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF7
PFAM:PF03999	SEG:seg	UniParc:UPI0002964971	UniProt:M0SXL3	MapMan:13.4.3.5	:

Description

65-kDa microtubule-associated protein 3 [Source:GMGC_GENE;Acc:GSMUA_Achr5G11340_001]

Coordinates

chr5:-:8126947..8130389

Molecular Weight (calculated)

75443.4 Da

IEP (calculated)

5.588

GRAVY (calculated)

-0.543

Length

667 amino acids

Sequence
(BLAST)

001: MARLSSDQLL QLETACGSIL YELQIIWDEV GESDAERDKM LLELEQECLD VYRRKVDQAN RCRAQLRQAI ADSEAELAAI CSALGEPPVH IRQSNHRTGS
101: LKEELKSIGP QLEEMRKRKV ERWNQFLEVI EQIRKISFEI TSSEGNQSKL AVDESDLSAR RLEDLYRQLE SLQKEKSDRL KQVMEHLSTL NALCSVLGVD
201: FKETVREIHP SLDESEVPKS VSNATIERLS IAIGRLREIK VERMQKLQDL ASTMLELWNL MDTPIEEQRL FQNVTSNIAA SESEITEANT LSPDFLNFVE
301: AEVLRLEQLK VSKMKELVLK KKTELEELRR RAHLVAEAEN DAELAISAIE SGAIDASLIL EQIEDQISTV KEEAFSRKDI LERVEKWLPA CEEEAWLEEY
401: NRDENRYNAG RGAHLALKRA EKARALVNKI PAMIETLAAK ITQWEKERGV EFTYDGVRLL SMLEEYTIVR QEKEQERKRQ RDQKKLQGQL IAEQEALYGS
501: KPSPLKPQSA KKLHRTSNGG PSRRLSLGGA AMQPPPKPDY LHSAKSGRST KKIDDLGTLS PGYRALVCIG ARGLDIAGLP MKKLSFTAHQ EMGAPRKPFA
601: PLAPVNHIPS TPAIEENAKP IITMTSNAMP APTPKTQAPA PMPTPVAPVE ELEYSFEERR LAFYLTR

Best Arabidopsis Sequence Match ( AT5G51600.1 )
(BLAST)

001: MASVQKDPIL QVETTCGSLL FELQIIWDEV GETETDRDQM LLELERECLE VYRRKVDQAN RCRAQLRQAI ADAEAQLAAI CSAMGERPVH IRQSDQSVGS
101: LKQELGRILP ELEEMQKRKV ERRNQFIVVM EQIDSITNDI KGQGELVHSE PLIDETNLSM RKLEELHCQL QVLQKEKIDR VETIRKHLCT LYSHCSVLGM
201: DFNEVVGQVN PTLSDPEGPR SLSDHTIEKL GAAVQKLMEV KIQRMQRLQD LATTMLELWN LMDTPIEEQQ EYQHITCNIA ASEHEITEAN SLSEDFIKYV
301: EAEVVRLDEV KASKMKELVL KKRSELEEIC RKTHLLPVSD SAIDQTIVAI ESGIVDATMV LEHLEQHISK IKEEALSRKE ILERVEKWLS ACDEESWLEE
401: YNRDDNRYNA GRGAHLTLKR AEKARNLVTK LPGMVEALAS KTIVWEQENG IEFLYDGIRL LSMLEEYNIL RQEREEEHRR QRDQKKLQGQ LIAEQEALYG
501: SKPSPSKPLG GKKAPRMSTG GASNRRLSLG AAMHQTPKPN KKADHRHNDG ALSNGRRGLD IAGLPSRKQS MNPSEMLQSP LVRKPFSPIS TTVVASKANI
601: ATTTTQQLPK NNAVNEISSF ATPIKNNNIL RNLEEEKMMT MMMQTPKNVA AMIPIPSTPA TVSVPMHTAP TPFTNNARLM SEKPEVVEYS FEERRLAFML
701: QSECRLV

Arabidopsis Description

MAP65-365-kDa microtubule-associated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.