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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G378900.1
TraesCS1B01G400200.1
TraesCS1D01G386100.1
TraesCS2A01G194000.1 nucleus
TraesCS2A01G196600.1
TraesCS2A01G320000.1 nucleus
TraesCS2B01G212800.1 nucleus
TraesCS2B01G224200.1
TraesCS2B01G363300.1 nucleus
TraesCS2D01G193800.1 nucleus
TraesCS2D01G204600.1
TraesCS2D01G343300.1 nucleus
TraesCS3A01G264600.1
TraesCS3B01G297900.1
TraesCS3D01G264700.2
TraesCS4A01G058600.1 nucleus
TraesCS4B01G246100.1 nucleus
TraesCS4D01G245500.2 nucleus
TraesCS5A01G142400.1 nucleus
TraesCS5B01G141100.1 nucleus
TraesCS5D01G149700.1 nucleus
TraesCS6A01G089500.2
TraesCS6B01G111900.1
TraesCSU01G016800.1
TraesCSU01G188700.1 nucleus

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G51600.1 TraesCS2A01G196600.1 AT2G22640.1 25262777
AT5G51600.1 TraesCS2B01G224200.1 AT2G22640.1 25262777
AT5G51600.1 TraesCS2D01G204600.1 AT2G22640.1 25262777
AT5G51600.1 TraesCS2A01G194000.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS2B01G212800.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS2D01G193800.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS4A01G058600.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS4B01G246100.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS4D01G245500.2 AT3G19590.1 25262777
AT5G51600.1 TraesCS2A01G194000.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS2B01G212800.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS2D01G193800.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS4A01G058600.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS4B01G246100.1 AT3G19590.1 25262777
AT5G51600.1 TraesCS4D01G245500.2 AT3G19590.1 25262777
AT5G51600.1 TraesCS2A01G320000.1 AT3G25980.1 25262777
AT5G51600.1 TraesCS2B01G363300.1 AT3G25980.1 25262777
AT5G51600.1 TraesCS2D01G343300.1 AT3G25980.1 25262777
AT5G51600.1 TraesCS2A01G320000.1 AT3G25980.1 25262777
AT5G51600.1 TraesCS2B01G363300.1 AT3G25980.1 25262777
AT5G51600.1 TraesCS2D01G343300.1 AT3G25980.1 25262777
AT5G51600.1 TraesCS5A01G142400.1 AT5G05510.1 25262777
AT5G51600.1 TraesCS5B01G141100.1 AT5G05510.1 25262777
AT5G51600.1 TraesCS5D01G149700.1 AT5G05510.1 25262777
AT5G51600.1 TraesCSU01G188700.1 AT5G05510.1 25262777
AT5G51600.1 TraesCS5A01G142400.1 AT5G05510.1 25262777
AT5G51600.1 TraesCS5B01G141100.1 AT5G05510.1 25262777
AT5G51600.1 TraesCS5D01G149700.1 AT5G05510.1 25262777
AT5G51600.1 TraesCSU01G188700.1 AT5G05510.1 25262777
AT5G51600.1 TraesCS1A01G378900.1 AT5G51600.1 25262777
AT5G51600.1 TraesCS1B01G400200.1 AT5G51600.1 25262777
AT5G51600.1 TraesCS1D01G386100.1 AT5G51600.1 25262777
AT5G51600.1 TraesCS3A01G264600.1 AT5G51600.1 25262777
AT5G51600.1 TraesCS3B01G297900.1 AT5G51600.1 25262777
AT5G51600.1 TraesCS3D01G264700.2 AT5G51600.1 25262777
AT5G51600.1 TraesCS6A01G089500.2 AT5G51600.1 25262777
AT5G51600.1 TraesCS6B01G111900.1 AT5G51600.1 25262777
AT5G51600.1 TraesCSU01G016800.1 AT5G51600.1 25262777
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G264700.2 Wheat cytosol 99.28 99.28
TraesCS3A01G264600.1 Wheat cytosol 98.99 99.13
HORVU3Hr1G063620.1 Barley plastid 96.38 89.14
Zm00001d030420_P001 Maize cytosol 26.96 81.22
Zm00001d011615_P001 Maize cytosol, nucleus, plastid 81.45 79.72
OQU87349 Sorghum golgi, vacuole 81.45 78.6
Zm00001d043831_P001 Maize cytosol, mitochondrion 80.87 76.02
TraesCS1B01G400200.1 Wheat cytosol 67.83 68.72
GSMUA_Achr5P11340_001 Banana cytosol 64.2 66.42
GSMUA_Achr1P02510_001 Banana cytosol 64.93 66.37
VIT_16s0022g01820.t01 Wine grape nucleus 63.04 59.59
Zm00001d006888_P001 Maize cytosol 23.04 59.55
KRG92454 Soybean nucleus 58.7 55.71
Solyc03g007130.2.1 Tomato nucleus 59.71 55.6
VIT_15s0048g00860.t01 Wine grape cytosol, nucleus, plasma membrane 48.12 55.43
PGSC0003DMT400079660 Potato cytosol 59.71 55.3
KRH34346 Soybean cytosol 59.28 54.9
KRH38719 Soybean cytosol 51.01 54.66
PGSC0003DMT400070431 Potato nucleus 54.93 54.61
Bra023930.1-P Field mustard cytosol 55.94 54.44
AT5G51600.1 Thale cress cytosol 55.51 54.17
Bra028266.1-P Field mustard cytosol 55.36 54.03
CDX86911 Canola nucleus 41.88 53.62
CDY00270 Canola nucleus 41.74 53.43
Bra010069.1-P Field mustard nucleus 41.59 53.25
Bra035900.1-P Field mustard nucleus 41.3 52.68
CDX87240 Canola nucleus 41.16 52.5
CDY16786 Canola nucleus 41.3 52.49
AT5G62250.1 Thale cress nucleus 41.3 51.91
Solyc11g072280.1.1 Tomato extracellular 56.96 50.97
TraesCS7B01G304900.2 Wheat cytosol 38.99 46.38
Solyc01g091380.2.1 Tomato plastid 47.97 44.49
TraesCS6B01G111900.1 Wheat nucleus 35.07 44.08
PGSC0003DMT400033224 Potato nucleus 48.12 43.97
KRH09228 Soybean cytosol 33.62 43.36
KRH40591 Soybean nucleus 43.62 42.94
Bra014467.1-P Field mustard cytosol 39.57 42.13
CDX89081 Canola cytosol 41.74 41.98
AT3G60840.1 Thale cress cytosol 41.01 41.8
CDY62713 Canola cytosol 41.3 41.67
Zm00001d046884_P001 Maize plastid 28.41 40.83
TraesCS7B01G190000.1 Wheat endoplasmic reticulum, golgi 36.09 40.49
TraesCS6B01G311200.1 Wheat cytosol 34.35 40.1
TraesCS5B01G232400.1 Wheat nucleus 34.2 40.07
TraesCS1B01G267200.2 Wheat cytosol 33.19 39.76
TraesCS4B01G230500.2 Wheat nucleus 35.07 39.61
TraesCS7B01G158100.1 Wheat cytosol, mitochondrion, nucleus 29.71 34.75
TraesCS4B01G051200.1 Wheat nucleus 30.0 33.5
Protein Annotations
EnsemblPlants:TraesCS3B01G297900.1EnsemblPlantsGene:TraesCS3B01G297900Gene3D:1.20.58.1520GO:GO:0000226GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016043InterPro:MAP65_Ase1_PRC1
ncoils:CoilPANTHER:PTHR19321PANTHER:PTHR19321:SF8PFAM:PF03999SEG:segMapMan:13.4.3.5
Description
No Description!
Coordinates
chr3B:-:477649848..477653699
Molecular Weight (calculated)
78505.8 Da
IEP (calculated)
5.991
GRAVY (calculated)
-0.601
Length
690 amino acids
Sequence
(BLAST)
001: MGSAVRDHQQ QLHPCDSLLL ELNVIWDEVG EPDTVRDKTL LELEQECLDV YRRKVDQANR CRAQLRQSIA EAEAELAGIC SAIGEPPVHV RQSNQKLHGL
101: REELNAIIPY LEEMRTKKVE RWNQFVHVLE EIKKISSEIR PSDFVPFKTP VDQSDLSLRK FEELTKELES LQKEKRERLK QVVDHLNTLH SLCEVLGIDF
201: KQTVHEVHPS LDEAEGSKNL SNTTIERLAS SVDRLREIKI QRMQKLQDFA STMLELWNLM DTPIEEQQMF QNVTCNIAAS EHEITEPNTL SIDFLSYVEA
301: EVLRLEQLKG SKMKDLVLKK KSELEEHRRR AHLIGEEGYS DEFNIEAIES GAIDPALVLE QIEAHIATVK DEAFSRKDIL EKVERFLNAC EEEAWLEDYN
401: KDDNRYNAGK GAHLTLKRAE KARILVNKIP GMVDVLTTKI IAWENERGKE FTYDGVRLLS MLDEYMIVRQ EKEQEKKRQR DQKKLHDQLK AEQEALYGSK
501: PSPSKPQSIK KAPRHSMGGV NRRVSMGGAT MQAPKTDILH SKNVRAAKRT EDIAHLSPAS RGLDIGDLPI KKLSFNATAL RETETPRKPF AQIMPPPSSV
601: PSTPARSVTN DTEDENRTPN PKTFGAALNL KTPMTVAAPM QLAMTPAVAS KVTAAPVSLV YEKPEPTLPE AIEYSFEERR LAVYLSREVV
Best Arabidopsis Sequence Match ( AT5G51600.1 )
(BLAST)
001: MASVQKDPIL QVETTCGSLL FELQIIWDEV GETETDRDQM LLELERECLE VYRRKVDQAN RCRAQLRQAI ADAEAQLAAI CSAMGERPVH IRQSDQSVGS
101: LKQELGRILP ELEEMQKRKV ERRNQFIVVM EQIDSITNDI KGQGELVHSE PLIDETNLSM RKLEELHCQL QVLQKEKIDR VETIRKHLCT LYSHCSVLGM
201: DFNEVVGQVN PTLSDPEGPR SLSDHTIEKL GAAVQKLMEV KIQRMQRLQD LATTMLELWN LMDTPIEEQQ EYQHITCNIA ASEHEITEAN SLSEDFIKYV
301: EAEVVRLDEV KASKMKELVL KKRSELEEIC RKTHLLPVSD SAIDQTIVAI ESGIVDATMV LEHLEQHISK IKEEALSRKE ILERVEKWLS ACDEESWLEE
401: YNRDDNRYNA GRGAHLTLKR AEKARNLVTK LPGMVEALAS KTIVWEQENG IEFLYDGIRL LSMLEEYNIL RQEREEEHRR QRDQKKLQGQ LIAEQEALYG
501: SKPSPSKPLG GKKAPRMSTG GASNRRLSLG AAMHQTPKPN KKADHRHNDG ALSNGRRGLD IAGLPSRKQS MNPSEMLQSP LVRKPFSPIS TTVVASKANI
601: ATTTTQQLPK NNAVNEISSF ATPIKNNNIL RNLEEEKMMT MMMQTPKNVA AMIPIPSTPA TVSVPMHTAP TPFTNNARLM SEKPEVVEYS FEERRLAFML
701: QSECRLV
Arabidopsis Description
MAP65-365-kDa microtubule-associated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.