Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00270 | Canola | nucleus | 85.79 | 87.38 |
| Bra010069.1-P | Field mustard | nucleus | 85.79 | 87.38 |
| CDX86911 | Canola | nucleus | 85.79 | 87.38 |
| Bra035900.1-P | Field mustard | nucleus | 84.7 | 85.95 |
| CDY16786 | Canola | nucleus | 84.88 | 85.82 |
| CDX87240 | Canola | nucleus | 84.52 | 85.77 |
| Zm00001d030420_P001 | Maize | cytosol | 21.49 | 51.53 |
| KRH38719 | Soybean | cytosol | 54.46 | 46.43 |
| GSMUA_Achr5P11340_001 | Banana | cytosol | 53.19 | 43.78 |
| VIT_16s0022g01820.t01 | Wine grape | nucleus | 57.74 | 43.42 |
| GSMUA_Achr5P10040_001 | Banana | nucleus | 49.91 | 43.22 |
| KRG92454 | Soybean | nucleus | 57.19 | 43.19 |
| GSMUA_Achr1P02510_001 | Banana | cytosol | 53.01 | 43.11 |
| AT5G51600.1 | Thale cress | cytosol | 55.01 | 42.72 |
| KRH34346 | Soybean | cytosol | 57.56 | 42.42 |
| TraesCS3B01G297900.1 | Wheat | cytosol | 51.91 | 41.3 |
| Solyc03g007130.2.1 | Tomato | nucleus | 55.56 | 41.16 |
| TraesCS3D01G264700.2 | Wheat | cytosol | 51.73 | 41.16 |
| TraesCS3A01G264600.1 | Wheat | cytosol | 51.55 | 41.07 |
| PGSC0003DMT400070431 | Potato | nucleus | 51.73 | 40.92 |
| PGSC0003DMT400079660 | Potato | cytosol | 55.37 | 40.81 |
| KRH09228 | Soybean | cytosol | 39.34 | 40.37 |
| Zm00001d011615_P001 | Maize | cytosol, nucleus, plastid | 51.18 | 39.86 |
| OQU87349 | Sorghum | golgi, vacuole | 51.73 | 39.72 |
| Os02t0126300-01 | Rice | plasma membrane | 40.07 | 39.36 |
| Solyc11g072280.1.1 | Tomato | extracellular | 54.46 | 38.78 |
| Zm00001d043831_P001 | Maize | cytosol, mitochondrion | 50.46 | 37.74 |
| AT4G26760.1 | Thale cress | cytosol | 39.53 | 37.54 |
| HORVU3Hr1G063620.1 | Barley | plastid | 50.82 | 37.4 |
| TraesCS1A01G378900.1 | Wheat | cytosol | 46.08 | 37.37 |
| Os05t0552900-01 | Rice | cytosol | 49.73 | 37.35 |
| TraesCS1B01G400200.1 | Wheat | cytosol | 46.27 | 37.3 |
| TraesCS1D01G386100.1 | Wheat | cytosol | 46.27 | 37.3 |
| EES06214 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 39.71 | 37.27 |
| TraesCSU01G016800.1 | Wheat | nucleus | 37.16 | 37.09 |
| TraesCS6B01G111900.1 | Wheat | nucleus | 36.98 | 36.98 |
| TraesCS6A01G089500.2 | Wheat | nucleus | 36.79 | 36.86 |
| HORVU1Hr1G083810.7 | Barley | cytosol | 45.72 | 36.7 |
| Zm00001d053956_P001 | Maize | nucleus | 39.71 | 36.58 |
| AT3G60840.1 | Thale cress | cytosol | 44.44 | 36.04 |
| Zm00001d006888_P001 | Maize | cytosol | 17.49 | 35.96 |
| AT5G55230.2 | Thale cress | cytosol | 40.26 | 35.88 |
| AT2G38720.1 | Thale cress | nucleus | 35.34 | 35.27 |
| AT1G14690.1 | Thale cress | cytosol | 38.62 | 35.16 |
| AT2G01910.1 | Thale cress | nucleus | 38.62 | 34.87 |
| Zm00001d015096_P002 | Maize | nucleus | 38.25 | 34.37 |
| AT1G27920.1 | Thale cress | nucleus | 34.06 | 33.27 |
| Zm00001d046884_P001 | Maize | plastid | 22.4 | 25.62 |
Protein Annotations
| Gene3D:1.20.58.1520 | MapMan:35.1 | EntrezGene:836346 | UniProt:A0A178UEH6 | ProteinID:AED97586.1 | ProteinID:ANM68950.1 |
| ArrayExpress:AT5G62250 | EnsemblPlantsGene:AT5G62250 | RefSeq:AT5G62250 | TAIR:AT5G62250 | RefSeq:AT5G62250-TAIR-G | EnsemblPlants:AT5G62250.1 |
| TAIR:AT5G62250.1 | ProteinID:BAA97189.1 | ncoils:Coil | EMBL:DQ056733 | GO:GO:0000226 | GO:GO:0000910 |
| GO:GO:0000922 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005856 | GO:GO:0007049 | GO:GO:0008017 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | Symbol:MAP65-9 | InterPro:MAP65_Ase1_PRC1 | RefSeq:NP_001318863.1 |
| RefSeq:NP_201031.1 | ProteinID:OAO92183.1 | PFAM:PF03999 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007616 |
| PO:PO:0009046 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR19321 | PANTHER:PTHR19321:SF7 | UniProt:Q4PSA3 |
| UniParc:UPI0000162918 | SEG:seg | : | : | : | : |
Description
MAP65-965-kDa microtubule-associated protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q4PSA3]
Coordinates
chr5:+:25005434..25008361
Molecular Weight (calculated)
63872.6 Da
IEP (calculated)
4.927
GRAVY (calculated)
-0.830
Length
549 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKSQIESTW SSLLQELEII WKEVGETETE REKILIEIEE ECREVYNRKI EKVKEEKIRI KQEIADSEAR VIDICSVMEE PPILGRHHQS DQQSGNGRSL
101: KDELVKILQK LEEMEKRKSE RKIQFIQVID DIRCVREEIN GESDDETCSS DFSADESDLS LRKLEELHRE LYTLQEQKRN RVKQIQDNIR TLESLCSVLG
201: LNFRETVTKI HPSLVDTEGS RSISNETLDK LASSVQQWHE TKIQRMQELQ DLVTTMLEFW NLMDTPAEEQ QKFMDVSCNI AATVSEITKP NSLSIDLLEE
301: VKAELCRLEE LKWSKMKELV LKKRSELEEI CRRTHIVLEE EDIAVENVIK AIESGDVNPE NILEQIEYRA GKVKEEALSR KEILEKADKW LNACEEENWL
401: EEYNQDENRY NAGKGSHLIL KRAEKARALV NKLPAMVEAL ASKITIWESE KEYEFLFDGN RLLSMLEEYT ELREEKEQER RRKRDLKKHQ GQVTSEQDKG
501: SVTKPQSAKK GLKVSTNKRF VSSPHTPQTD SPHSAKSNQS FSTPLSRHG
101: KDELVKILQK LEEMEKRKSE RKIQFIQVID DIRCVREEIN GESDDETCSS DFSADESDLS LRKLEELHRE LYTLQEQKRN RVKQIQDNIR TLESLCSVLG
201: LNFRETVTKI HPSLVDTEGS RSISNETLDK LASSVQQWHE TKIQRMQELQ DLVTTMLEFW NLMDTPAEEQ QKFMDVSCNI AATVSEITKP NSLSIDLLEE
301: VKAELCRLEE LKWSKMKELV LKKRSELEEI CRRTHIVLEE EDIAVENVIK AIESGDVNPE NILEQIEYRA GKVKEEALSR KEILEKADKW LNACEEENWL
401: EEYNQDENRY NAGKGSHLIL KRAEKARALV NKLPAMVEAL ASKITIWESE KEYEFLFDGN RLLSMLEEYT ELREEKEQER RRKRDLKKHQ GQVTSEQDKG
501: SVTKPQSAKK GLKVSTNKRF VSSPHTPQTD SPHSAKSNQS FSTPLSRHG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.