Factsheet for AT5G55230.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028986.1-P	Field mustard	cytosol	87.99	92.18
Bra002922.1-P	Field mustard	cytosol	87.34	91.97
CDY17313	Canola	cytosol	87.34	91.97
CDY19902	Canola	cytosol	87.34	91.97
Bra035564.1-P	Field mustard	cytosol	84.42	88.59
CDY06596	Canola	cytosol	84.58	88.45
CDY20777	Canola	cytosol	84.09	87.95
CDY36737	Canola	nucleus	88.47	86.51
CDY12006	Canola	cytosol	87.5	83.7
AT4G26760.1	Thale cress	cytosol	76.79	81.83
KRH73815	Soybean	cytosol	74.35	78.69
KRH14311	Soybean	endoplasmic reticulum	74.19	77.46
VIT_19s0090g01230.t01	Wine grape	endoplasmic reticulum	67.86	74.64
Solyc07g064970.2.1	Tomato	nucleus	68.67	72.81
PGSC0003DMT400057428	Potato	cytosol	68.67	72.81
KRH14315	Soybean	cytosol, endoplasmic reticulum	70.29	72.65
GSMUA_Achr3P13450_001	Banana	cytosol	68.99	72.16
GSMUA_Achr4P19380_001	Banana	cytosol	67.86	71.33
GSMUA_Achr4P03890_001	Banana	cytosol	67.69	71.16
PGSC0003DMT400033471	Potato	cytosol	66.23	71.08
KRG98677	Soybean	cytosol	50.65	71.07
GSMUA_Achr7P06200_001	Banana	cytosol	67.37	70.58
Solyc12g014490.1.1	Tomato	cytosol	64.61	70.19
KRH46253	Soybean	nucleus	34.42	67.3
Os06t0308300-01	Rice	golgi	61.36	65.62
TraesCS7D01G399400.1	Wheat	cytosol	61.69	65.52
TraesCS7B01G304900.2	Wheat	cytosol	61.53	65.34
Os06t0611000-01	Rice	nucleus	61.36	65.06
HORVU7Hr1G094860.1	Barley	cytosol	61.2	65.0
TraesCS7A01G405500.1	Wheat	cytosol	61.04	64.83
EER89674	Sorghum	cytosol	62.01	64.53
TraesCS7D01G224800.1	Wheat	cytosol	60.71	64.26
EER88641	Sorghum	cytosol	59.74	63.45
TraesCS7A01G223100.1	Wheat	cytosol, nucleus, plastid	60.39	62.73
HORVU7Hr1G045770.7	Barley	endoplasmic reticulum	60.39	60.78
TraesCS7B01G190000.1	Wheat	endoplasmic reticulum, golgi	60.39	60.49
TraesCS6D01G263300.1	Wheat	cytosol	56.66	59.45
TraesCS6A01G282800.1	Wheat	cytosol	56.17	58.94
HORVU6Hr1G070900.6	Barley	cytosol	56.33	58.81
Zm00001d037413_P002	Maize	cytosol	60.23	58.8
Os02t0720200-01	Rice	cytosol	56.01	58.57
TraesCS6B01G311200.1	Wheat	cytosol	55.84	58.21
Zm00001d045864_P004	Maize	mitochondrion	60.23	54.8
AT2G38720.1	Thale cress	nucleus	41.56	46.55
AT2G01910.1	Thale cress	nucleus	43.99	44.57
AT1G14690.1	Thale cress	cytosol	43.34	44.28
AT1G27920.1	Thale cress	nucleus	39.61	43.42
AT5G62250.1	Thale cress	nucleus	35.88	40.26
AT5G51600.1	Thale cress	cytosol	43.83	38.19
AT3G60840.1	Thale cress	cytosol	38.47	35.01

Protein Annotations

Gene3D:1.20.58.1520	MapMan:35.1	EntrezGene:835616	ProteinID:AED96603.1	ArrayExpress:AT5G55230	EnsemblPlantsGene:AT5G55230
RefSeq:AT5G55230	TAIR:AT5G55230	RefSeq:AT5G55230-TAIR-G	EnsemblPlants:AT5G55230.2	TAIR:AT5G55230.2	Symbol:ATMAP65-1
Unigene:At.7440	ncoils:Coil	UniProt:F4K3E4	GO:GO:0000226	GO:GO:0000910	GO:GO:0000911
GO:GO:0001578	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005819	GO:GO:0005829	GO:GO:0005856
GO:GO:0005874	GO:GO:0007020	GO:GO:0007049	GO:GO:0007275	GO:GO:0008017	GO:GO:0008150
GO:GO:0008283	GO:GO:0009524	GO:GO:0009574	GO:GO:0009791	GO:GO:0009987	GO:GO:0010005
GO:GO:0016043	GO:GO:0031116	GO:GO:0046785	GO:GO:0048528	GO:GO:0055028	GO:GO:0072686
Symbol:MAP65-1	InterPro:MAP65_Ase1_PRC1	RefSeq:NP_001190542.1	PFAM:PF03999	PO:PO:0000005	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR19321
PANTHER:PTHR19321:SF15	UniParc:UPI0001E930DA	SEG:seg	:	:	:

Description

ATMAP65-1Microtubule-associated proteins 65-1 [Source:UniProtKB/TrEMBL;Acc:F4K3E4]

Coordinates

chr5:+:22401997..22405381

Molecular Weight (calculated)

69092.6 Da

IEP (calculated)

4.813

GRAVY (calculated)

-0.566

Length

616 amino acids

Sequence
(BLAST)

001: MAVTDTESPH LGEITCGTLL EKLQEIWDEV GESDDERDKL LLQIEQECLD VYKRKVEQAA KSRAELLQTL SDANAELSSL TMSLGDKSLV GIPDKSSGTI
101: KEQLAAIAPA LEQLWQQKEE RVREFSDVQS QIQKICGDIA GGLSNEVPIV DESDLSLKKL DDFQSQLQEL QKEKSDRLRK VLEFVSTVHD LCAVLGLDFL
201: STVTEVHPSL DEDTSVQSKS ISNETLSRLA KTVLTLKDDK KQRLQKLQEL ATQLIDLWNL MDTPDEEREL FDHVTCNISS SVDEVTVPGA LARDLIEQVI
301: YIALINLPMS SLRNQLLLAN IHVKFVKAEV EVDRLDQLKA SRMKEIAFKK QSELEEIYAR AHVEVNPESA RERIMSLIDS GNVEPTELLA DMDSQISKAK
401: EEAFSRKDIL DRVEKWMSAC EEESWLEDYN RDQNRYSASR GAHLNLKRAE KARILVSKIP AMVDTLVAKT RAWEEEHSMS FAYDGVPLLA MLDEYGMLRQ
501: EREEEKRRLR EQKKVQEQPH VEQESAFSTR PSPARPVSAK KTVGPRANNG GANGTHNRRL SLNANQNGSR STAKEAGRRE TLNRPAAPTN YVAISKEEAA
601: SSPVSGAADH QVPASP

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.