Factsheet for Bra035564.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20777	Canola	cytosol	96.93	96.6
Bra002922.1-P	Field mustard	cytosol	88.93	89.23
Bra028986.1-P	Field mustard	cytosol	88.25	88.1
AT5G55230.2	Thale cress	cytosol	88.59	84.42
Bra010428.1-P	Field mustard	cytosol	78.02	78.69
Bra026405.1-P	Field mustard	cytosol	74.28	76.63
KRH73815	Soybean	cytosol	74.28	74.91
KRH14311	Soybean	endoplasmic reticulum	74.28	73.9
VIT_19s0090g01230.t01	Wine grape	endoplasmic reticulum	66.78	70.0
Solyc07g064970.2.1	Tomato	nucleus	68.82	69.54
PGSC0003DMT400057428	Potato	cytosol	68.82	69.54
KRH14315	Soybean	cytosol, endoplasmic reticulum	70.36	69.3
GSMUA_Achr3P13450_001	Banana	cytosol	69.51	69.27
PGSC0003DMT400033471	Potato	cytosol	67.46	68.99
GSMUA_Achr7P06200_001	Banana	cytosol	68.65	68.54
GSMUA_Achr4P19380_001	Banana	cytosol	68.31	68.43
KRG98677	Soybean	cytosol	50.94	68.11
Solyc12g014490.1.1	Tomato	cytosol	65.59	67.9
GSMUA_Achr4P03890_001	Banana	cytosol	67.29	67.41
Os06t0308300-01	Rice	golgi	62.69	63.89
KRH46253	Soybean	nucleus	33.73	62.86
Os06t0611000-01	Rice	nucleus	62.01	62.65
EER89674	Sorghum	cytosol	62.86	62.33
TraesCS7D01G399400.1	Wheat	cytosol	61.5	62.24
TraesCS7B01G304900.2	Wheat	cytosol	61.16	61.9
TraesCS7D01G224800.1	Wheat	cytosol	61.16	61.68
TraesCS7A01G405500.1	Wheat	cytosol	60.82	61.55
HORVU7Hr1G094860.1	Barley	cytosol	60.82	61.55
EER88641	Sorghum	cytosol	60.65	61.38
TraesCS7A01G223100.1	Wheat	cytosol, nucleus, plastid	61.67	61.05
HORVU7Hr1G045770.7	Barley	endoplasmic reticulum	61.33	58.82
TraesCS7B01G190000.1	Wheat	endoplasmic reticulum, golgi	61.5	58.7
TraesCS6D01G263300.1	Wheat	cytosol	58.09	58.09
TraesCS6A01G282800.1	Wheat	cytosol	57.58	57.58
HORVU6Hr1G070900.6	Barley	cytosol	57.75	57.46
Zm00001d037413_P002	Maize	cytosol	61.16	56.89
TraesCS6B01G311200.1	Wheat	cytosol	57.24	56.85
Os02t0720200-01	Rice	cytosol	56.73	56.54
Zm00001d045864_P004	Maize	mitochondrion	60.99	52.88
Bra017106.1-P	Field mustard	nucleus	40.55	43.35
Bra026811.1-P	Field mustard	cytosol, nucleus, plastid	43.61	43.03
Bra024843.1-P	Field mustard	nucleus	44.29	42.76
Bra010069.1-P	Field mustard	nucleus	37.31	40.63
Bra035900.1-P	Field mustard	nucleus	36.12	39.19
Bra032853.1-P	Field mustard	cytosol	39.18	38.08
Bra023930.1-P	Field mustard	cytosol	43.1	35.68
Bra028266.1-P	Field mustard	cytosol	42.76	35.5
Bra014467.1-P	Field mustard	cytosol	36.12	32.72
Bra026625.1-P	Field mustard	mitochondrion	17.38	26.56

Protein Annotations

EnsemblPlants:Bra035564.1	EnsemblPlants:Bra035564.1-P	EnsemblPlantsGene:Bra035564	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0000910
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF15
PFAM:PF03999	UniParc:UPI000254648E	UniProt:M4F3B4	MapMan:13.4.3.6	:	:

Description

AT5G55230 (E=4e-291) ATMAP65-1, MAP65-1 | ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1); microtubule binding

Coordinates

chrA02:-:7513852..7516823

Molecular Weight (calculated)

65519.1 Da

IEP (calculated)

4.919

GRAVY (calculated)

-0.599

Length

587 amino acids

Sequence
(BLAST)

001: MAITDAQSPH LGEITCGTLL QKLQEIWDEV GESDEQRDKM LLQIEQECLD VYKRKVEQAA KSRAELLQTL SDANAELSSL TTSLGEKTFA NGIPDKSSGT
101: IKEQLAAIAP ALEQLWQQKE ERVRAFSDVQ SQIQKISGEI AGGLSNNQLP PIVDESDLSL KKLDSFHSQL QELQKEKSDR LHKVLEFVST VHDLCAVLAL
201: DFLTTVTQVH PSLDEETAVQ AKSISNDTLS MLSKTVLTLE DDKKQRLRKL QELATQLVDL WNLMDTPDEE RDLFNHVTCN ISSSVDDVTS PGALARDLIN
301: QAEVEVDRLD QLKASRMKEI AFKKQSELEE IYARAHVEIN PESARERIMS LIDAGNVEHT ELLADMDSQI AKAREEAVSR KDVLDRVEKW MSACEEESWL
401: EDYNRDHNRY SSSRGAHLNL KRAEKARILV SKIPTMVDTL VAKIRAWEEE HSMSFAYDGV PLLAMLDEYG MLRQEREDEK RRLREQKKVQ EQPHVEQDSA
501: FSTRPSTAAR PVSAKKPVGT RANNGGANRR LSLNANQNGS RSVAKEGGRR ESLNKPAAPA NYVAISKEEA AASSPVSGAA DQVSASP

Best Arabidopsis Sequence Match ( AT5G55230.1 )
(BLAST)

001: MAVTDTESPH LGEITCGTLL EKLQEIWDEV GESDDERDKL LLQIEQECLD VYKRKVEQAA KSRAELLQTL SDANAELSSL TMSLGDKSLV GIPDKSSGTI
101: KEQLAAIAPA LEQLWQQKEE RVREFSDVQS QIQKICGDIA GGLSNEVPIV DESDLSLKKL DDFQSQLQEL QKEKSDRLRK VLEFVSTVHD LCAVLGLDFL
201: STVTEVHPSL DEDTSVQSKS ISNETLSRLA KTVLTLKDDK KQRLQKLQEL ATQLIDLWNL MDTPDEEREL FDHVTCNISS SVDEVTVPGA LARDLIEQAE
301: VEVDRLDQLK ASRMKEIAFK KQSELEEIYA RAHVEVNPES ARERIMSLID SGNVEPTELL ADMDSQISKA KEEAFSRKDI LDRVEKWMSA CEEESWLEDY
401: NRDQNRYSAS RGAHLNLKRA EKARILVSKI PAMVDTLVAK TRAWEEEHSM SFAYDGVPLL AMLDEYGMLR QEREEEKRRL REQKKVQEQP HVEQESAFST
501: RPSPARPVSA KKTVGPRANN GGANGTHNRR LSLNANQNGS RSTAKEAGRR ETLNRPAAPT NYVAISKEEA ASSPVSGAAD HQVPASP

Arabidopsis Description

ATMAP65-1Microtubule-associated proteins 65-1 [Source:UniProtKB/TrEMBL;Acc:F4K3E4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.