Factsheet for Bra017106.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18372	Canola	nucleus	98.18	91.36
AT2G38720.1	Thale cress	nucleus	82.51	82.36
VIT_13s0084g00080.t01	Wine grape	cytosol, nucleus, plastid	59.02	57.65
Solyc01g096680.2.1	Tomato	nucleus	55.92	53.95
KRH20613	Soybean	cytosol	55.37	53.62
PGSC0003DMT400008510	Potato	plastid	48.27	52.89
GSMUA_Achr9P17360_001	Banana	cytosol	54.1	51.12
KXG21994	Sorghum	cytosol	47.91	45.98
TraesCS1D01G256000.1	Wheat	cytosol	44.99	45.91
TraesCS1B01G267200.2	Wheat	cytosol	47.54	45.31
TraesCS1A01G256800.1	Wheat	nucleus	47.36	45.14
Os05t0409400-01	Rice	cytosol, nucleus, plastid	49.18	44.7
Zm00001d038174_P002	Maize	cytosol	48.45	43.39
Bra002922.1-P	Field mustard	cytosol	44.26	41.54
Bra028986.1-P	Field mustard	cytosol	44.44	41.5
Bra026405.1-P	Field mustard	cytosol	42.99	41.48
Bra010428.1-P	Field mustard	cytosol	43.9	41.41
HORVU1Hr1G063330.5	Barley	golgi	46.99	40.69
Bra035564.1-P	Field mustard	cytosol	43.35	40.55
Bra024843.1-P	Field mustard	nucleus	43.72	39.47
Bra026811.1-P	Field mustard	cytosol, nucleus, plastid	41.53	38.32
Bra010069.1-P	Field mustard	nucleus	36.25	36.92
Zm00001d007926_P001	Maize	cytosol	10.75	36.88
Bra035900.1-P	Field mustard	nucleus	35.7	36.23
Zm00001d004213_P001	Maize	cytosol	9.84	35.76
Zm00001d003920_P001	Maize	cytosol	8.56	34.06
Bra032853.1-P	Field mustard	cytosol	37.16	33.77
Bra028266.1-P	Field mustard	cytosol	40.62	31.54
Bra023930.1-P	Field mustard	cytosol	40.62	31.45
Bra014467.1-P	Field mustard	cytosol	35.7	30.25
Bra026625.1-P	Field mustard	mitochondrion	17.12	24.48

Protein Annotations

EnsemblPlants:Bra017106.1	EnsemblPlants:Bra017106.1-P	EnsemblPlantsGene:Bra017106	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0000910
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF4
PFAM:PF03999	SEG:seg	UniParc:UPI00025449CE	UniProt:M4DKS5	MapMan:35.1	:

Description

AT2G38720 (E=4e-170) MAP65-5 | MAP65-5 (MICROTUBULE-ASSOCIATED PROTEIN 65-5); microtubule binding

Coordinates

chrA04:+:16581159..16584301

Molecular Weight (calculated)

62160.1 Da

IEP (calculated)

6.462

GRAVY (calculated)

-0.667

Length

549 amino acids

Sequence
(BLAST)

001: MSLSSSTTCT SLLQELQIIW DEIGEGYSER DKMLLELEQE CLDIYNKKVD KTRNHRAELQ RSLAQSEAEI ATLVSALGEQ VSFSKKEGSL KEQISSVKPV
101: LEELMVKKDM RWKEVSEIVT QIAEISSNIA GNDSPVSSGF EVDGSDLTKR KLDELRAHLQ DLRSEKAVRL QKVNSYISAV HELSEILSFD FSKALSNVHK
201: SLTGASKSIS NDTLARLTEL VESLRKERRQ RLLKLQGLGR NMQELWSLME TPTDERRRFD NLSILLSVQA DDALGKGCLG LDIVREAEDE VNRLNALKSS
301: KMKELVLKRH CELEEICREV HMDFNSDAGR QSLIDVIDSG DADLSGILES LDEQIEKAKE EALSRKEILD KVEKLKHAKE EEKWLDDYEK DENRFSAVRG
401: AHKNLKRAEK ARSLISKIPA MIDGLTTKVK AWEKERGVPF LCDKHPLLQT LEEEIVLRAQ REEEKRQFRE QKRLQGQLAT EKEAKYGSKS AKKKPLGQSL
501: LNTDNVTKTP LGRRVGTTPG RSGVKDYRES GRGNATAIPL NYVALQKED

Best Arabidopsis Sequence Match ( AT2G38720.1 )
(BLAST)

001: MSPSSTTTCT SLLEELQMIW DEIGESYNER DKMLLELEQE CLDIYNKKVE KTRKFRAELQ RSLAQAEAEI ASLMSALGEK VSFAKKEGSL KEQISSVKPV
101: LEDLLMKKDR RRKELSETLN QIAEITSNIA GNDYTVSSGS EVDESDLTQR KLDELRADLQ DLRNEKAVRL QKVNSYISAV HELSEILSFD FSKALNSVHS
201: SLTEFSKTHS KSISNDTLAR FTELVKSLKA EKHERLLKLQ GLGRSMQELW NLMETPMDER RRFDHCSSLL SSLPDDALKK GCLSLDIIRE AEDEVRRLNS
301: LKSSKMKELV FKRQCELEEI CRGNHMDINS DAARKSLVEL IESGDGDLSD ILASIDGQIE KAREEALSRK EILDKVDKWR HAKEEETWLD DYEKDENRFS
401: AVRGAHKNLK RAEKARSLIS KIPAMVDVLT TKVKAWEKER GVPFLCDKQP LLQTLEDDIV IRAQREEEKR QFREQKRLQG QLATEKEAKY GSKSAKKKPL
501: GQSLNTDNVT KTPIGRRIGN TPGRSVTSGG KDYRGNAVIP LNYVALQKDD

Arabidopsis Description

MAP65-565-kDa microtubule-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.