Factsheet for Bra032853.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27637	Canola	cytosol	89.9	95.26
CDX84899	Canola	extracellular, nucleus, plastid	88.74	93.38
AT1G27920.1	Thale cress	nucleus	77.98	83.81
VIT_01s0010g03540.t01	Wine grape	cytosol	58.11	61.9
KRG97427	Soybean	cytosol	56.29	61.71
KRH31473	Soybean	cytosol	57.12	58.08
Solyc05g015320.2.1	Tomato	extracellular	56.13	56.97
PGSC0003DMT400074853	Potato	cytosol	55.63	56.47
GSMUA_Achr11P...	Banana	nucleus	48.68	51.13
Os08t0531100-01	Rice	cytosol	40.56	50.2
Zm00001d031619_P001	Maize	nucleus	45.53	46.53
EES15312	Sorghum	cytosol	45.53	46.53
TraesCS7A01G260100.2	Wheat	nucleus	44.04	45.08
TraesCS7D01G261100.1	Wheat	nucleus	44.04	45.08
TraesCS7B01G158100.1	Wheat	cytosol, mitochondrion, nucleus	43.87	44.92
HORVU7Hr1G054130.4	Barley	mitochondrion	44.04	40.0
Bra026405.1-P	Field mustard	cytosol	37.42	39.72
Bra028986.1-P	Field mustard	cytosol	38.58	39.63
Bra002922.1-P	Field mustard	cytosol	38.24	39.49
Bra035564.1-P	Field mustard	cytosol	38.08	39.18
Bra010428.1-P	Field mustard	cytosol	37.25	38.66
Bra017106.1-P	Field mustard	nucleus	33.77	37.16
Zm00001d049816_P001	Maize	nucleus	15.73	34.8
Bra035900.1-P	Field mustard	nucleus	30.3	33.83
Bra010069.1-P	Field mustard	nucleus	30.13	33.77
Bra024843.1-P	Field mustard	nucleus	33.44	33.22
Bra026811.1-P	Field mustard	cytosol, nucleus, plastid	32.62	33.11
Bra028266.1-P	Field mustard	cytosol	33.77	28.85
Bra023930.1-P	Field mustard	cytosol	33.61	28.63
Bra014467.1-P	Field mustard	cytosol	28.81	26.85
Bra026625.1-P	Field mustard	mitochondrion	14.24	22.4

Protein Annotations

Gene3D:1.20.58.1520	MapMan:35.1	EnsemblPlantsGene:Bra032853	EnsemblPlants:Bra032853.1	EnsemblPlants:Bra032853.1-P	ncoils:Coil
GO:GO:0000226	GO:GO:0000910	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005819	GO:GO:0005856	GO:GO:0005874
GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009524	GO:GO:0009987	GO:GO:0016043
UniProt:M4EVM0	InterPro:MAP65_Ase1_PRC1	PFAM:PF03999	PANTHER:PTHR19321	PANTHER:PTHR19321:SF3	UniParc:UPI000254252F
SEG:seg	:	:	:	:	:

Description

AT1G27920 (E=7e-238) MAP65-8 | MAP65-8 (MICROTUBULE-ASSOCIATED PROTEIN 65-8)

Coordinates

chrA09:-:12389415..12392541

Molecular Weight (calculated)

69728.7 Da

IEP (calculated)

6.617

GRAVY (calculated)

-0.759

Length

604 amino acids

Sequence
(BLAST)

001: MEEEGDAEEQ SLKQEVSIAE YVSLSLLSSK QNQHHQYHKP DHTSIPIREN SSIRRWMIWD EVGEDKFERE KVLLDIEQEC VEAYRRKVDH ANIARSRLHQ
101: ELAESEAELT HLLLCLGERS VPGRPEKKEG TLREQLDAIA PALREMRLRK DERVKQVRSV KGEIQKISAE IAGRSTYEES STNIKIDDND LSIKKLEEYQ
201: NELHRLHDEK NERLQKVEIY ICAIRDLSAT LETEASMIIT KIHPSLNDLY GISKNISDDI LKKLNGTVVS LEEEKQKRLE KIHHLGRALS NLWNLMDASY
301: EDRQKFSHVI ELLSFEPSDV CAPGSITSGI IQQAEAEVKR LDQLKASKTK ELFLKKQKEL ETTCNISHME TPSTEVGDII NLVDSGEIDH VELLNAMDEK
401: IARAKEEAAS RKVIIEKVDR WMLARDEERW LEEYDQDENR YSVSRNAHKN LRRAERARKE VSKITGLVES ILVKTKIWEA ERQKVFLYNE EPLIAMLQEY
501: SNLRQEKEVE KLRLREKKKI IPPPVAQQDN FYVARPASSN RRISNRSING GYGSASPLNR KLSRGFNNNT SYTALGTSLR RESSVIIKNT WPSAHSLASW
601: QHSP

Best Arabidopsis Sequence Match ( AT1G27920.1 )
(BLAST)

001: MGSLQTPIEM RSSSLLDTSC GYLLRELQMI WDEVGEDKFE REKVLLDIEQ ECVEAYRRKV DHANVSRSRL HQELAESEAE LTHFLLCLGE RSVPGRPEKK
101: GGTLREQLDS IAPALREMRL RKDERVKQFR SVKGEIQKIS AEIAGRSTYE DSTRKITIDD NDLSNKKLEE YQNELHRLHD EKNERLQKVD IYICAIRDLS
201: ATLGTEASMI ITKIHPSLND LYGISKNISD DILKKLNGTV VSLEEEKHKR LEKLHHLGRA LSNLWNLMDA SYEDRQKFFH VIDLLSSAPS DVCAPGSITL
301: DIIQQAEAEV KRLDQLKASR IKELFIKKQK ELEDTCNMSH METPSTEMGN ITNLVDSGEV DHVDLLAAMD EKIARAKEEA ASRKGIIEKV DRWMLASDEE
401: RWLEEYDQDE NRYSVSRNAH RNLRRAERAR ITVSKISGLV ESILVKAKSW EVERQKVFLY NEVPLVAMLQ EYNKLRQEKE MEKQRLREMK KMSIPQPVAE
501: GDNFYMARPA SSNRRISNRS MNGGFGSGSP INRKYSGGFN NTNNNYTALG TSIRRESRKS EA

Arabidopsis Description

MAP65-865-kDa microtubule-associated protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7G0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.