CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84899	Canola	extracellular, nucleus, plastid	97.89	97.21
Bra032853.1-P	Field mustard	cytosol	95.26	89.9
AT1G27920.1	Thale cress	nucleus	84.91	86.12
KRG97427	Soybean	cytosol	62.11	64.25
VIT_01s0010g03540.t01	Wine grape	cytosol	60.7	61.02
KRH31473	Soybean	cytosol	62.46	59.93
Solyc05g015320.2.1	Tomato	extracellular	61.05	58.49
PGSC0003DMT400074853	Potato	cytosol	60.53	57.98
GSMUA_Achr11P...	Banana	nucleus	52.98	52.52
Os08t0531100-01	Rice	cytosol	44.04	51.43
Zm00001d031619_P001	Maize	nucleus	48.77	47.04
EES15312	Sorghum	cytosol	48.6	46.87
TraesCS7A01G260100.2	Wheat	nucleus	47.19	45.59
TraesCS7B01G158100.1	Wheat	cytosol, mitochondrion, nucleus	47.19	45.59
TraesCS7D01G261100.1	Wheat	nucleus	47.19	45.59
CDX89305	Canola	cytosol	40.7	40.77
HORVU7Hr1G054130.4	Barley	mitochondrion	47.02	40.3
CDY20777	Canola	cytosol	41.58	40.24
CDY17313	Canola	cytosol	41.23	40.17
CDY19902	Canola	cytosol	41.23	40.17
CDY14300	Canola	nucleus	40.35	39.52
CDY06596	Canola	cytosol	40.7	39.39
CDY36737	Canola	nucleus	41.4	37.46
Zm00001d049816_P001	Maize	nucleus	17.54	36.63
CDY12006	Canola	cytosol	41.23	36.49
CDY18372	Canola	nucleus	36.32	35.08
CDX87240	Canola	nucleus	33.16	34.94
CDX93308	Canola	nucleus	35.96	34.8
CDX94287	Canola	nucleus	40.18	34.59
CDX86911	Canola	nucleus	32.28	34.14
CDY00270	Canola	nucleus	32.28	34.14
CDY16786	Canola	nucleus	32.46	34.07
CDX81663	Canola	cytosol	35.44	33.78
CDY33748	Canola	cytosol	35.26	33.67
CDY17624	Canola	nucleus	35.61	33.39
CDY03090	Canola	nucleus	35.79	32.85
CDY15798	Canola	endoplasmic reticulum, golgi	21.58	29.15
CDX97365	Canola	nucleus	40.18	28.27
CDX89081	Canola	cytosol	31.93	26.53
CDY62713	Canola	cytosol	31.05	25.88
CDY09401	Canola	endoplasmic reticulum, golgi, plasma membrane	18.42	18.45

Protein Annotations

Gene3D:1.20.58.1520	MapMan:35.1	GO:A0A078GR59	UniProt:A0A078GR59	EnsemblPlants:CDY27637	ProteinID:CDY27637
ProteinID:CDY27637.1	ncoils:Coil	GO:GO:0000226	GO:GO:0000910	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
EnsemblPlantsGene:GSBRNA2T00038392001	InterPro:MAP65_Ase1_PRC1	PFAM:PF03999	PANTHER:PTHR19321	PANTHER:PTHR19321:SF3	UniParc:UPI0004EF156C
SEG:seg	:	:	:	:	:

Description

BnaA09g27700DBnaA09g27700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GR59]

Coordinates

chrLK032207:+:458657..462119

Molecular Weight (calculated)

65630.5 Da

IEP (calculated)

6.802

GRAVY (calculated)

-0.642

Length

570 amino acids

Sequence
(BLAST)

001: MGSLQIPIGM RSSSLLDMSC GYLLKEMLSL FCTQMIWDEV GEDKFEREKV LLDIEQECVE AYRRKVDHAN IARSRLHQEL AESEAELTHL LLCLGERSVP
101: GRPEKKEGTL REQLDAIAPA LREMRLRKDE RVKQVRSVKG EIQKISAEIA GRSTYEESST NIKIDDNDLS IKKLEEYQNE LHRLHDEKNE RLQKVEIYIC
201: AIRDLSATLE TEASMIITKI HPSLNDLYGI SKNISDDILK KLNGTVVSLE EEKQKRLEKI HHLGRALSNL WNLMDASYED RQKFSHVIEL LSFEPSDVCA
301: PGSITSGIIQ QAEAEVKRLD QLKASKTKEL FLKKQKELET TCNISHMETP STEVGDIINL VDSGEIDHIE LLNAMDEKIA RAKEEAASRK VIIEKVDRWM
401: LARDEERWLE EYDQDENRYS VSRNAHKNLR RAERARKEVS KITGLVESIL VKTKIWEAER QKVFLYNEEP LIAMLQEYSN LRQEKEVEKL RLREKKKIIP
501: PPVAQQDNFY VARPASSNRR ISNRSINGGY GSASPLNRKL SRGFNNNTSY TALGTSLRRE SSVIIKNTWP

Best Arabidopsis Sequence Match ( AT1G27920.1 )
(BLAST)

001: MGSLQTPIEM RSSSLLDTSC GYLLRELQMI WDEVGEDKFE REKVLLDIEQ ECVEAYRRKV DHANVSRSRL HQELAESEAE LTHFLLCLGE RSVPGRPEKK
101: GGTLREQLDS IAPALREMRL RKDERVKQFR SVKGEIQKIS AEIAGRSTYE DSTRKITIDD NDLSNKKLEE YQNELHRLHD EKNERLQKVD IYICAIRDLS
201: ATLGTEASMI ITKIHPSLND LYGISKNISD DILKKLNGTV VSLEEEKHKR LEKLHHLGRA LSNLWNLMDA SYEDRQKFFH VIDLLSSAPS DVCAPGSITL
301: DIIQQAEAEV KRLDQLKASR IKELFIKKQK ELEDTCNMSH METPSTEMGN ITNLVDSGEV DHVDLLAAMD EKIARAKEEA ASRKGIIEKV DRWMLASDEE
401: RWLEEYDQDE NRYSVSRNAH RNLRRAERAR ITVSKISGLV ESILVKAKSW EVERQKVFLY NEVPLVAMLQ EYNKLRQEKE MEKQRLREMK KMSIPQPVAE
501: GDNFYMARPA SSNRRISNRS MNGGFGSGSP INRKYSGGFN NTNNNYTALG TSIRRESRKS EA

Arabidopsis Description

MAP65-865-kDa microtubule-associated protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7G0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.