Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017106.1-P | Field mustard | nucleus | 91.36 | 98.18 |
| CDX93308 | Canola | nucleus | 89.83 | 89.98 |
| AT2G38720.1 | Thale cress | nucleus | 76.44 | 82.0 |
| VIT_13s0084g00080.t01 | Wine grape | cytosol, nucleus, plastid | 55.42 | 58.19 |
| Solyc01g096680.2.1 | Tomato | nucleus | 52.37 | 54.31 |
| KRH20613 | Soybean | cytosol | 51.69 | 53.79 |
| PGSC0003DMT400008510 | Potato | plastid | 45.25 | 53.29 |
| GSMUA_Achr9P17360_001 | Banana | cytosol | 50.85 | 51.64 |
| KXG21994 | Sorghum | cytosol | 44.58 | 45.98 |
| TraesCS1D01G256000.1 | Wheat | cytosol | 41.69 | 45.72 |
| TraesCS1B01G267200.2 | Wheat | cytosol | 44.07 | 45.14 |
| TraesCS1A01G256800.1 | Wheat | nucleus | 43.9 | 44.97 |
| Os05t0409400-01 | Rice | cytosol, nucleus, plastid | 45.42 | 44.37 |
| Zm00001d038174_P002 | Maize | cytosol | 44.75 | 43.07 |
| CDX89305 | Canola | cytosol | 40.0 | 41.48 |
| CDY17313 | Canola | cytosol | 41.02 | 41.37 |
| CDY19902 | Canola | cytosol | 41.02 | 41.37 |
| CDY06596 | Canola | cytosol | 41.19 | 41.26 |
| CDY14300 | Canola | nucleus | 40.34 | 40.89 |
| CDY20777 | Canola | cytosol | 40.68 | 40.75 |
| HORVU1Hr1G063330.5 | Barley | golgi | 43.56 | 40.54 |
| CDY17624 | Canola | nucleus | 40.34 | 39.14 |
| CDY36737 | Canola | nucleus | 41.69 | 39.05 |
| CDY33748 | Canola | cytosol | 39.15 | 38.69 |
| CDX81663 | Canola | cytosol | 38.81 | 38.29 |
| CDY12006 | Canola | cytosol | 41.53 | 38.04 |
| CDY03090 | Canola | nucleus | 39.49 | 37.52 |
| CDX86911 | Canola | nucleus | 33.9 | 37.11 |
| Zm00001d007926_P001 | Maize | cytosol | 10.0 | 36.88 |
| CDY00270 | Canola | nucleus | 33.56 | 36.73 |
| CDY27637 | Canola | cytosol | 35.08 | 36.32 |
| CDY15798 | Canola | endoplasmic reticulum, golgi | 25.93 | 36.26 |
| CDY16786 | Canola | nucleus | 33.22 | 36.1 |
| CDX84899 | Canola | extracellular, nucleus, plastid | 35.08 | 36.06 |
| CDX87240 | Canola | nucleus | 33.05 | 36.04 |
| Zm00001d004213_P001 | Maize | cytosol | 9.15 | 35.76 |
| CDX94287 | Canola | nucleus | 39.66 | 35.35 |
| Zm00001d003920_P001 | Maize | cytosol | 7.97 | 34.06 |
| CDY62713 | Canola | cytosol | 35.25 | 30.41 |
| CDX89081 | Canola | cytosol | 35.08 | 30.17 |
| CDX97365 | Canola | nucleus | 40.17 | 29.26 |
| CDY09401 | Canola | endoplasmic reticulum, golgi, plasma membrane | 21.02 | 21.79 |
Protein Annotations
| Gene3D:1.20.58.1520 | MapMan:35.1 | GO:A0A078G062 | UniProt:A0A078G062 | EnsemblPlants:CDY18372 | ProteinID:CDY18372 |
| ProteinID:CDY18372.1 | ncoils:Coil | GO:GO:0000226 | GO:GO:0000910 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0007049 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| EnsemblPlantsGene:GSBRNA2T00005359001 | InterPro:MAP65_Ase1_PRC1 | PFAM:PF03999 | PANTHER:PTHR19321 | PANTHER:PTHR19321:SF4 | UniParc:UPI0004EE096D |
| SEG:seg | : | : | : | : | : |
Description
BnaA04g22150DBnaA04g22150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G062]
Coordinates
chrLK032085:-:101036..104299
Molecular Weight (calculated)
66910.7 Da
IEP (calculated)
7.150
GRAVY (calculated)
-0.632
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLSSSTTCT SLLQELQIIW DEIGEGYSER DKMLLELEQE CLDIYNKKVD KTRNHRAELQ RSLAQSEAEI ATLVSALGEQ VSFSKKEGSL KEQISSVKPV
101: LEELMVKKDM RWKEVSEIVT QIAEISSNIA GNDSLVSSGF EVDGSDLTKR KLDELRAHLQ DLRSEKAVRL QKVNSYISAV HELSEILSFD FSKALSNVHK
201: SLTGASKSIS NDTLARLTEL VESLRKERRQ RLLKLQGLGR NMQELWSLME TTADERRRFD NLSILLSVQA DDALGKGCLG LDIVREAEDE VERLNALKSS
301: KMKELVLKRH YELEEICREV HMDFNSDAAR QSLIDVIDSV TKVSFAGDAD LFGILESLDE QIEKAKEEAL SRKEILDKVE KLKHAKEEEK WLDDYEKDEN
401: RFSAVRGAHK NLKRAEKARS LISKIPGEYP FGLVFNNLFS FHSKILITNS STRGHRNSKT HSMVDGLTTK VKAWEKERGV PFLCDKHPLL QTLEEEIVLR
501: AQREEEKRQF REQKRLQGQL ATEKEAKYGS KSAKKKPLGQ SLNTDNVTKT PLGRRVGTTP GRSGVKDYRE SGRGNATAIP LNYVALQKED
101: LEELMVKKDM RWKEVSEIVT QIAEISSNIA GNDSLVSSGF EVDGSDLTKR KLDELRAHLQ DLRSEKAVRL QKVNSYISAV HELSEILSFD FSKALSNVHK
201: SLTGASKSIS NDTLARLTEL VESLRKERRQ RLLKLQGLGR NMQELWSLME TTADERRRFD NLSILLSVQA DDALGKGCLG LDIVREAEDE VERLNALKSS
301: KMKELVLKRH YELEEICREV HMDFNSDAAR QSLIDVIDSV TKVSFAGDAD LFGILESLDE QIEKAKEEAL SRKEILDKVE KLKHAKEEEK WLDDYEKDEN
401: RFSAVRGAHK NLKRAEKARS LISKIPGEYP FGLVFNNLFS FHSKILITNS STRGHRNSKT HSMVDGLTTK VKAWEKERGV PFLCDKHPLL QTLEEEIVLR
501: AQREEEKRQF REQKRLQGQL ATEKEAKYGS KSAKKKPLGQ SLNTDNVTKT PLGRRVGTTP GRSGVKDYRE SGRGNATAIP LNYVALQKED
001: MSPSSTTTCT SLLEELQMIW DEIGESYNER DKMLLELEQE CLDIYNKKVE KTRKFRAELQ RSLAQAEAEI ASLMSALGEK VSFAKKEGSL KEQISSVKPV
101: LEDLLMKKDR RRKELSETLN QIAEITSNIA GNDYTVSSGS EVDESDLTQR KLDELRADLQ DLRNEKAVRL QKVNSYISAV HELSEILSFD FSKALNSVHS
201: SLTEFSKTHS KSISNDTLAR FTELVKSLKA EKHERLLKLQ GLGRSMQELW NLMETPMDER RRFDHCSSLL SSLPDDALKK GCLSLDIIRE AEDEVRRLNS
301: LKSSKMKELV FKRQCELEEI CRGNHMDINS DAARKSLVEL IESGDGDLSD ILASIDGQIE KAREEALSRK EILDKVDKWR HAKEEETWLD DYEKDENRFS
401: AVRGAHKNLK RAEKARSLIS KIPAMVDVLT TKVKAWEKER GVPFLCDKQP LLQTLEDDIV IRAQREEEKR QFREQKRLQG QLATEKEAKY GSKSAKKKPL
501: GQSLNTDNVT KTPIGRRIGN TPGRSVTSGG KDYRGNAVIP LNYVALQKDD
101: LEDLLMKKDR RRKELSETLN QIAEITSNIA GNDYTVSSGS EVDESDLTQR KLDELRADLQ DLRNEKAVRL QKVNSYISAV HELSEILSFD FSKALNSVHS
201: SLTEFSKTHS KSISNDTLAR FTELVKSLKA EKHERLLKLQ GLGRSMQELW NLMETPMDER RRFDHCSSLL SSLPDDALKK GCLSLDIIRE AEDEVRRLNS
301: LKSSKMKELV FKRQCELEEI CRGNHMDINS DAARKSLVEL IESGDGDLSD ILASIDGQIE KAREEALSRK EILDKVDKWR HAKEEETWLD DYEKDENRFS
401: AVRGAHKNLK RAEKARSLIS KIPAMVDVLT TKVKAWEKER GVPFLCDKQP LLQTLEDDIV IRAQREEEKR QFREQKRLQG QLATEKEAKY GSKSAKKKPL
501: GQSLNTDNVT KTPIGRRIGN TPGRSVTSGG KDYRGNAVIP LNYVALQKDD
Arabidopsis Description
MAP65-565-kDa microtubule-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.