Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400008510 | Potato | plastid | 85.59 | 97.21 |
| VIT_13s0084g00080.t01 | Wine grape | cytosol, nucleus, plastid | 62.39 | 63.17 |
| KRH20613 | Soybean | cytosol | 59.4 | 59.61 |
| GSMUA_Achr9P17360_001 | Banana | cytosol | 58.52 | 57.31 |
| Bra017106.1-P | Field mustard | nucleus | 53.95 | 55.92 |
| AT2G38720.1 | Thale cress | nucleus | 53.78 | 55.64 |
| CDY18372 | Canola | nucleus | 54.31 | 52.37 |
| CDX93308 | Canola | nucleus | 53.95 | 52.12 |
| TraesCS1D01G256000.1 | Wheat | cytosol | 48.15 | 50.93 |
| TraesCS1B01G267200.2 | Wheat | cytosol | 50.97 | 50.35 |
| TraesCS1A01G256800.1 | Wheat | nucleus | 50.79 | 50.17 |
| KXG21994 | Sorghum | cytosol | 49.56 | 49.3 |
| Os05t0409400-01 | Rice | cytosol, nucleus, plastid | 51.67 | 48.68 |
| Zm00001d038174_P002 | Maize | cytosol | 50.62 | 46.98 |
| Solyc07g064970.2.1 | Tomato | nucleus | 47.63 | 46.64 |
| HORVU1Hr1G063330.5 | Barley | golgi | 50.97 | 45.74 |
| Solyc12g014490.1.1 | Tomato | cytosol | 45.17 | 45.33 |
| Solyc05g015320.2.1 | Tomato | extracellular | 41.83 | 40.0 |
| Zm00001d007926_P001 | Maize | cytosol | 11.25 | 40.0 |
| Zm00001d004213_P001 | Maize | cytosol | 10.37 | 39.07 |
| Zm00001d003920_P001 | Maize | cytosol | 9.31 | 38.41 |
| Solyc01g005080.2.1 | Tomato | cytosol | 36.2 | 36.85 |
| Solyc04g008290.2.1 | Tomato | nucleus | 38.84 | 36.83 |
| Solyc03g007130.2.1 | Tomato | nucleus | 42.18 | 32.39 |
| Solyc11g072280.1.1 | Tomato | extracellular | 41.48 | 30.61 |
| Solyc01g091380.2.1 | Tomato | plastid | 37.79 | 28.9 |
Protein Annotations
| EnsemblPlants:Solyc01g096680.2.1 | EnsemblPlantsGene:Solyc01g096680.2 | Gene3D:1.20.58.1520 | GO:GO:0000226 | GO:GO:0000910 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007049 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016043 | InterPro:MAP65_Ase1_PRC1 | ncoils:Coil | PANTHER:PTHR19321 | PANTHER:PTHR19321:SF4 | PFAM:PF03999 |
| SEG:seg | UniParc:UPI0002767A7A | UniProt:K4B056 | MapMan:35.1 | : | : |
Description
65-kDa microtubule-associated protein 5 [Source:Projected from Arabidopsis thaliana (AT2G38720) UniProtKB/Swiss-Prot;Acc:Q9ZVJ3]
Coordinates
chr1:-:87704620..87712771
Molecular Weight (calculated)
64412.0 Da
IEP (calculated)
6.851
GRAVY (calculated)
-0.562
Length
569 amino acids
Sequence
(BLAST)
(BLAST)
001: MSITDTVSSP LSLSKSATTT CSSLLQELQE IWDEIGESDS ERDKKLLQVE QECLDIYRRN VDKERKYKAE LHLSLAEADA EISKLVSALG EQVSLPLSGK
101: MKGTLKQKLA VIDPVLKDIR TKKHERIKDF LNIETQIAAI CAEIAGNDTV ISPTDTQVSE QDLTVKRLGE LKSHLQELQS EKNLRLLRVN SYMSAIHELT
201: VVMSLDFKNI IANINPSLAN HLNVQSKSIS NETLASLTSE VNSLKQLKQQ RLDRLQDLGS SLIELWNLMD MPMEEQLRFN HVTSLVSSSI DEITRQGSLA
301: IHIVEQAEVE VERLNALKTS KLRELIFKRQ NELEEIYRNV HMDVDSETAR QILIQLMESA ALCSDLSNLL SSMDDQVVKA KEQASSRKEV LDKVEKWKHA
401: SQEESWLDEY EKDDNRYSAG KGVHINLKRA EKARILVSKI PSLVENLTAK IKAWEKERGM PFLYHKAPLL HTLEEYIISR QEKQEEKRRS REQKRLQDQF
501: AAEQETIYGS KSAKKPLGNA NTVPGTPNSR RMSTPSGRYG ASIGKEKRGS GHVIPINYVS LAKDDQKCG
101: MKGTLKQKLA VIDPVLKDIR TKKHERIKDF LNIETQIAAI CAEIAGNDTV ISPTDTQVSE QDLTVKRLGE LKSHLQELQS EKNLRLLRVN SYMSAIHELT
201: VVMSLDFKNI IANINPSLAN HLNVQSKSIS NETLASLTSE VNSLKQLKQQ RLDRLQDLGS SLIELWNLMD MPMEEQLRFN HVTSLVSSSI DEITRQGSLA
301: IHIVEQAEVE VERLNALKTS KLRELIFKRQ NELEEIYRNV HMDVDSETAR QILIQLMESA ALCSDLSNLL SSMDDQVVKA KEQASSRKEV LDKVEKWKHA
401: SQEESWLDEY EKDDNRYSAG KGVHINLKRA EKARILVSKI PSLVENLTAK IKAWEKERGM PFLYHKAPLL HTLEEYIISR QEKQEEKRRS REQKRLQDQF
501: AAEQETIYGS KSAKKPLGNA NTVPGTPNSR RMSTPSGRYG ASIGKEKRGS GHVIPINYVS LAKDDQKCG
001: MSPSSTTTCT SLLEELQMIW DEIGESYNER DKMLLELEQE CLDIYNKKVE KTRKFRAELQ RSLAQAEAEI ASLMSALGEK VSFAKKEGSL KEQISSVKPV
101: LEDLLMKKDR RRKELSETLN QIAEITSNIA GNDYTVSSGS EVDESDLTQR KLDELRADLQ DLRNEKAVRL QKVNSYISAV HELSEILSFD FSKALNSVHS
201: SLTEFSKTHS KSISNDTLAR FTELVKSLKA EKHERLLKLQ GLGRSMQELW NLMETPMDER RRFDHCSSLL SSLPDDALKK GCLSLDIIRE AEDEVRRLNS
301: LKSSKMKELV FKRQCELEEI CRGNHMDINS DAARKSLVEL IESGDGDLSD ILASIDGQIE KAREEALSRK EILDKVDKWR HAKEEETWLD DYEKDENRFS
401: AVRGAHKNLK RAEKARSLIS KIPAMVDVLT TKVKAWEKER GVPFLCDKQP LLQTLEDDIV IRAQREEEKR QFREQKRLQG QLATEKEAKY GSKSAKKKPL
501: GQSLNTDNVT KTPIGRRIGN TPGRSVTSGG KDYRGNAVIP LNYVALQKDD
101: LEDLLMKKDR RRKELSETLN QIAEITSNIA GNDYTVSSGS EVDESDLTQR KLDELRADLQ DLRNEKAVRL QKVNSYISAV HELSEILSFD FSKALNSVHS
201: SLTEFSKTHS KSISNDTLAR FTELVKSLKA EKHERLLKLQ GLGRSMQELW NLMETPMDER RRFDHCSSLL SSLPDDALKK GCLSLDIIRE AEDEVRRLNS
301: LKSSKMKELV FKRQCELEEI CRGNHMDINS DAARKSLVEL IESGDGDLSD ILASIDGQIE KAREEALSRK EILDKVDKWR HAKEEETWLD DYEKDENRFS
401: AVRGAHKNLK RAEKARSLIS KIPAMVDVLT TKVKAWEKER GVPFLCDKQP LLQTLEDDIV IRAQREEEKR QFREQKRLQG QLATEKEAKY GSKSAKKKPL
501: GQSLNTDNVT KTPIGRRIGN TPGRSVTSGG KDYRGNAVIP LNYVALQKDD
Arabidopsis Description
MAP65-565-kDa microtubule-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.