Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G256000.1 | Wheat | cytosol | 91.49 | 97.96 |
| TraesCS1A01G256800.1 | Wheat | nucleus | 97.74 | 97.74 |
| HORVU1Hr1G063330.5 | Barley | golgi | 96.01 | 87.22 |
| KXG21994 | Sorghum | cytosol | 75.17 | 75.7 |
| Os05t0409400-01 | Rice | cytosol, nucleus, plastid | 78.99 | 75.33 |
| Zm00001d038174_P002 | Maize | cytosol | 75.17 | 70.64 |
| Zm00001d003920_P001 | Maize | cytosol | 16.32 | 68.12 |
| Zm00001d007926_P001 | Maize | cytosol | 18.4 | 66.25 |
| Zm00001d004213_P001 | Maize | cytosol | 17.36 | 66.23 |
| GSMUA_Achr9P17360_001 | Banana | cytosol | 59.55 | 59.04 |
| VIT_13s0084g00080.t01 | Wine grape | cytosol, nucleus, plastid | 56.25 | 57.65 |
| PGSC0003DMT400008510 | Potato | plastid | 45.31 | 52.1 |
| KRH20613 | Soybean | cytosol | 50.17 | 50.97 |
| Solyc01g096680.2.1 | Tomato | nucleus | 50.35 | 50.97 |
| AT2G38720.1 | Thale cress | nucleus | 46.18 | 48.36 |
| Bra017106.1-P | Field mustard | nucleus | 45.31 | 47.54 |
| CDX93308 | Canola | nucleus | 45.31 | 44.31 |
| CDY18372 | Canola | nucleus | 45.14 | 44.07 |
| TraesCS7B01G304900.2 | Wheat | cytosol | 44.1 | 43.79 |
| TraesCS7B01G190000.1 | Wheat | endoplasmic reticulum, golgi | 42.88 | 40.16 |
| TraesCS6B01G311200.1 | Wheat | cytosol | 40.28 | 39.26 |
| TraesCS4B01G230500.2 | Wheat | nucleus | 39.76 | 37.48 |
| TraesCS5B01G232400.1 | Wheat | nucleus | 36.81 | 35.99 |
| TraesCS6B01G111900.1 | Wheat | nucleus | 32.99 | 34.61 |
| TraesCS4B01G051200.1 | Wheat | nucleus | 36.98 | 34.47 |
| TraesCS1B01G400200.1 | Wheat | cytosol | 40.28 | 34.07 |
| TraesCS3B01G297900.1 | Wheat | cytosol | 39.76 | 33.19 |
| TraesCS7B01G158100.1 | Wheat | cytosol, mitochondrion, nucleus | 33.85 | 33.05 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G267200.2 | EnsemblPlantsGene:TraesCS1B01G267200 | Gene3D:1.20.58.1520 | GO:GO:0000226 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:MAP65_Ase1_PRC1 |
| ncoils:Coil | PANTHER:PTHR19321 | PANTHER:PTHR19321:SF4 | PFAM:PF03999 | SEG:seg | MapMan:35.1 |
Description
No Description!
Coordinates
chr1B:+:470295315..470300668
Molecular Weight (calculated)
65459.9 Da
IEP (calculated)
6.905
GRAVY (calculated)
-0.635
Length
576 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPPSPPPP TRASCGSLLQ ELQELWGEIG PDELERDRMI LQLEEDCLNV YRKKVEQTRK QKADLLQVMS LGEAEIEKIL SALGERESFS RVEKLGGTLM
101: EQLAKLEPVL DDLRRRRDER INEFLAVQLH IVRLQAEISG TINHGDPAAP LVDETDLSTG RLAELKTQLN ELQTEKNLRL QKIDGQIKCI NEMCNMMSLD
201: LKKTLYEVHP SFVELERIKS MSISDSTLDR LAGKLHALNQ EKKQRLRKLQ DLGSTLIELW SLMDTPLDEQ KCFDHVTSLI SVSPNTVMPQ GCLAHDLIEK
301: VEVEVKRLKH LKASKMKELV LKKMTQLEEI YRSVHMHIDS DHEWRILTEL IDSGRADLSE LLTDMDDRIA EARDLALSRK DILEKVEKWT SATEEEGWLG
401: EYEGDQNRYN AGRGAHINLK RAEKARVLVS KIPSLLENLT TKVNAWEKEK GMPFMYDKKR LLDSLEKYTS ERQQKEEEKR RSRELKKLQE QFAAEQGAPY
501: GAKPSPMRPL SARKPLGQST NVNIVGGTPN SRRVTTPVSR KGGLSCGKMK DTGKTAASIP ANYVSLPKDC SDNSYM
101: EQLAKLEPVL DDLRRRRDER INEFLAVQLH IVRLQAEISG TINHGDPAAP LVDETDLSTG RLAELKTQLN ELQTEKNLRL QKIDGQIKCI NEMCNMMSLD
201: LKKTLYEVHP SFVELERIKS MSISDSTLDR LAGKLHALNQ EKKQRLRKLQ DLGSTLIELW SLMDTPLDEQ KCFDHVTSLI SVSPNTVMPQ GCLAHDLIEK
301: VEVEVKRLKH LKASKMKELV LKKMTQLEEI YRSVHMHIDS DHEWRILTEL IDSGRADLSE LLTDMDDRIA EARDLALSRK DILEKVEKWT SATEEEGWLG
401: EYEGDQNRYN AGRGAHINLK RAEKARVLVS KIPSLLENLT TKVNAWEKEK GMPFMYDKKR LLDSLEKYTS ERQQKEEEKR RSRELKKLQE QFAAEQGAPY
501: GAKPSPMRPL SARKPLGQST NVNIVGGTPN SRRVTTPVSR KGGLSCGKMK DTGKTAASIP ANYVSLPKDC SDNSYM
001: MSPSSTTTCT SLLEELQMIW DEIGESYNER DKMLLELEQE CLDIYNKKVE KTRKFRAELQ RSLAQAEAEI ASLMSALGEK VSFAKKEGSL KEQISSVKPV
101: LEDLLMKKDR RRKELSETLN QIAEITSNIA GNDYTVSSGS EVDESDLTQR KLDELRADLQ DLRNEKAVRL QKVNSYISAV HELSEILSFD FSKALNSVHS
201: SLTEFSKTHS KSISNDTLAR FTELVKSLKA EKHERLLKLQ GLGRSMQELW NLMETPMDER RRFDHCSSLL SSLPDDALKK GCLSLDIIRE AEDEVRRLNS
301: LKSSKMKELV FKRQCELEEI CRGNHMDINS DAARKSLVEL IESGDGDLSD ILASIDGQIE KAREEALSRK EILDKVDKWR HAKEEETWLD DYEKDENRFS
401: AVRGAHKNLK RAEKARSLIS KIPAMVDVLT TKVKAWEKER GVPFLCDKQP LLQTLEDDIV IRAQREEEKR QFREQKRLQG QLATEKEAKY GSKSAKKKPL
501: GQSLNTDNVT KTPIGRRIGN TPGRSVTSGG KDYRGNAVIP LNYVALQKDD
101: LEDLLMKKDR RRKELSETLN QIAEITSNIA GNDYTVSSGS EVDESDLTQR KLDELRADLQ DLRNEKAVRL QKVNSYISAV HELSEILSFD FSKALNSVHS
201: SLTEFSKTHS KSISNDTLAR FTELVKSLKA EKHERLLKLQ GLGRSMQELW NLMETPMDER RRFDHCSSLL SSLPDDALKK GCLSLDIIRE AEDEVRRLNS
301: LKSSKMKELV FKRQCELEEI CRGNHMDINS DAARKSLVEL IESGDGDLSD ILASIDGQIE KAREEALSRK EILDKVDKWR HAKEEETWLD DYEKDENRFS
401: AVRGAHKNLK RAEKARSLIS KIPAMVDVLT TKVKAWEKER GVPFLCDKQP LLQTLEDDIV IRAQREEEKR QFREQKRLQG QLATEKEAKY GSKSAKKKPL
501: GQSLNTDNVT KTPIGRRIGN TPGRSVTSGG KDYRGNAVIP LNYVALQKDD
Arabidopsis Description
MAP65-565-kDa microtubule-associated protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.