Factsheet for TraesCS4B01G051200.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G263800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	97.73	97.42
TraesCS4D01G051300.1	Wheat	cytosol	91.75	95.94
HORVU4Hr1G008440.3	Barley	nucleus	96.28	84.16
Os03t0719000-01	Rice	cytosol, nucleus	61.33	80.3
EER90980	Sorghum	cytosol	79.77	77.88
KRH09582	Soybean	cytosol, mitochondrion, nucleus	13.11	53.64
GSMUA_Achr10P...	Banana	nucleus	50.0	51.16
KRH46955	Soybean	cytosol	23.14	50.53
VIT_01s0011g06330.t01	Wine grape	nucleus	46.93	48.41
KRH01846	Soybean	extracellular	26.86	47.98
TraesCS4B01G230500.2	Wheat	nucleus	47.25	47.79
CDY17624	Canola	nucleus	46.76	47.53
GSMUA_Achr6P05980_001	Banana	cytosol	45.63	47.4
Bra024843.1-P	Field mustard	nucleus	46.6	47.37
Zm00001d033794_P001	Maize	nucleus	77.18	47.23
KRH40910	Soybean	cytosol, mitochondrion, nucleus	45.31	46.59
KRG89099	Soybean	cytosol	45.15	46.42
CDY03090	Canola	nucleus	46.28	46.05
TraesCS5B01G232400.1	Wheat	nucleus	43.69	45.84
AT2G01910.1	Thale cress	nucleus	44.98	45.72
Solyc01g005080.2.1	Tomato	cytosol	41.26	45.62
Solyc04g008290.2.1	Tomato	nucleus	43.53	44.83
PGSC0003DMT400058659	Potato	cytosol, plastid	43.53	44.76
PGSC0003DMT400075869	Potato	nucleus	43.37	44.74
CDX81663	Canola	cytosol	42.23	43.65
CDY33748	Canola	cytosol	42.07	43.55
CDY15798	Canola	endoplasmic reticulum, golgi	29.61	43.36
Bra026811.1-P	Field mustard	cytosol, nucleus, plastid	41.75	43.36
AT1G14690.1	Thale cress	cytosol	42.07	43.12
TraesCS7B01G304900.2	Wheat	cytosol	38.84	41.38
TraesCS1B01G267200.2	Wheat	cytosol	34.47	36.98
TraesCS6B01G311200.1	Wheat	cytosol	34.79	36.38
TraesCS7B01G190000.1	Wheat	endoplasmic reticulum, golgi	35.44	35.61
TraesCS7B01G158100.1	Wheat	cytosol, mitochondrion, nucleus	31.55	33.05
TraesCS1B01G400200.1	Wheat	cytosol	34.14	30.98
TraesCS6B01G111900.1	Wheat	nucleus	27.51	30.97
GSMUA_Achr2P21660_001	Banana	endoplasmic reticulum, extracellular	46.6	30.38
TraesCS3B01G297900.1	Wheat	cytosol	33.5	30.0
Bra026625.1-P	Field mustard	mitochondrion	16.34	26.3
CDY09401	Canola	endoplasmic reticulum, golgi, plasma membrane	20.23	21.97

Protein Annotations

EnsemblPlants:TraesCS4B01G051200.1	EnsemblPlantsGene:TraesCS4B01G051200	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1
ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF14	PFAM:PF03999	SEG:seg	MapMan:35.1

Description

No Description!

Coordinates

chr4B:-:39757308..39762474

Molecular Weight (calculated)

68176.7 Da

IEP (calculated)

8.879

GRAVY (calculated)

-0.499

Length

618 amino acids

Sequence
(BLAST)

001: MGELAAELLY NMAPLALSGG GAEVGSCAPL LAELRQLWGE IGKSREERER MVHELEAECT RVYRRKVDEA TGERALLHQS LAASEAEIAA LTAALGAENS
101: TQFKVNKWTV SLNERVSSAT ALLEELRAMR AERSKQFSDI RSEIEKISAE IAGRSHGQDT SPRAGDGHDL TIRRLGEYRA RLSTLQKEKS DRLHKVLEHV
201: TEVHSLCDVL GEDFIAIVNE VHPGLHEADP GKPTSISDTT LTRLSQVVAM LTSEKAKRAA MLREAVVPLV ELWDLMDSPA EERRGFQKAA AVLKPAKEEV
301: LLSSGVLSMA SIKKTEEEVE RLTRLKAGRM KELVLKRRLE LENICRSMHV EPDASTVPEK SIALIDSGLV NPSELMASID DQIAKAKEEH QSRKDIMEKI
401: NKWLLACEEE KWLDDHNVDE NRFSTGRTAR MNLKRAEKAR VIIMKIPAIV DNLMSRTLAW ESERKKPFLY DGARLVAVLE EHKQARLRQE EERRRLREQK
501: KLRTLFSEKE TMPRLKRPSG SGGGGFSRTP EPGSMNRKRV DAGRLTCSAP SMRSSSSGSS CGGGGGGRSS AELDRPRSSA AGAGRCGELL QGARRLSFNY
601: VAVAKAGGGM SSSLASLS

Best Arabidopsis Sequence Match ( AT1G14690.1 )
(BLAST)

001: MLEIESPTSL CFRTNTTCNA LLRELQKIWV DIGESDAEKD RMLMELEKEC LEIYRRKVDE AANSKAQLHQ SLVSIEAEIA SLLAALGVFN SHSPMKAKEG
101: SKSLKEKLAA VRPMLEDLRL QKDERMKQFV DIKAQIEKMS GEISGYSDQL NKTMVGSLAL DEQDLTLRKL NEYQTHLRSL QKEKSDRLNK VLDYVNEVHT
201: LCGVLGVDFG QTVSEVHPSL HRTDHEQSTN ISDDTLDGLH HMIHKLKTER SVRFQKLKDV AGSLFELWNL MDTSQEERTK FASVSYVVRS SESDITEPNI
301: LSSETIEQVS AEVDCFNKLK ASRMKELVMK RRTELENLCR LAHIEADTST SLEKSTALID SGLVDPSELL TNIELHINKI KEEAHSRKEI IDRIDRWLSA
401: CEEENWLEEY NQDETRYSAG RGGHVNLKHA ERARITVNKI PSMVDNLIKK TLLWEDETRK SFLYDGVRLV SILEDYKLTR KQQEEEKRRY RDQKKMQDLL
501: IKRRESIYGS KPSPRRSNSV RKTNGYNGDA SVPPTPRRNS AGATNNDIMT TPRSYSSHRQ NGYFKEVRRL STAPLNFVAI PKEDSVSTYT SVCGSEPDSP
601: LYN

Arabidopsis Description

MAP65-765-kDa microtubule-associated protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L836]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.