Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024843.1-P | Field mustard | nucleus | 99.84 | 99.84 |
| CDY03090 | Canola | nucleus | 94.9 | 92.91 |
| AT2G01910.1 | Thale cress | nucleus | 91.78 | 91.78 |
| CDY15798 | Canola | endoplasmic reticulum, golgi | 60.36 | 86.97 |
| CDX81663 | Canola | cytosol | 79.44 | 80.77 |
| CDY33748 | Canola | cytosol | 78.12 | 79.56 |
| VIT_01s0011g06330.t01 | Wine grape | nucleus | 71.22 | 72.29 |
| KRG89099 | Soybean | cytosol | 68.42 | 69.22 |
| KRH40910 | Soybean | cytosol, mitochondrion, nucleus | 68.42 | 69.22 |
| PGSC0003DMT400075869 | Potato | nucleus | 66.61 | 67.61 |
| Solyc04g008290.2.1 | Tomato | nucleus | 66.61 | 67.5 |
| Solyc01g005080.2.1 | Tomato | cytosol | 61.02 | 66.37 |
| KRH09582 | Soybean | cytosol, mitochondrion, nucleus | 16.28 | 65.56 |
| PGSC0003DMT400058659 | Potato | cytosol, plastid | 64.8 | 65.56 |
| KRH46955 | Soybean | cytosol | 29.77 | 63.96 |
| GSMUA_Achr6P23030_001 | Banana | cytosol | 58.55 | 63.35 |
| KRH01846 | Soybean | extracellular | 34.87 | 61.27 |
| GSMUA_Achr10P... | Banana | nucleus | 59.21 | 59.6 |
| Os09t0450300-01 | Rice | nucleus | 57.73 | 58.99 |
| EER98994 | Sorghum | nucleus | 57.24 | 58.39 |
| TraesCS5D01G240800.1 | Wheat | nucleus | 56.09 | 57.89 |
| TraesCS5A01G233900.1 | Wheat | nucleus | 55.43 | 57.51 |
| TraesCS5B01G232400.1 | Wheat | nucleus | 55.43 | 57.22 |
| GSMUA_Achr6P04350_001 | Banana | cytosol | 59.05 | 56.98 |
| TraesCS4A01G074200.2 | Wheat | nucleus | 56.58 | 56.3 |
| TraesCS4D01G231800.3 | Wheat | nucleus | 56.41 | 56.14 |
| TraesCS4B01G230500.2 | Wheat | nucleus | 56.25 | 55.97 |
| Os03t0237600-04 | Rice | nucleus | 55.1 | 54.92 |
| EER92583 | Sorghum | cytosol | 55.1 | 54.83 |
| GSMUA_Achr6P05980_001 | Banana | cytosol | 53.45 | 54.62 |
| Zm00001d028363_P001 | Maize | cytosol | 54.77 | 54.5 |
| Zm00001d020685_P002 | Maize | cytosol | 57.57 | 54.43 |
| Os03t0719000-01 | Rice | cytosol, nucleus | 37.99 | 48.94 |
| HORVU4Hr1G064580.2 | Barley | endoplasmic reticulum, nucleus, plastid | 56.41 | 47.51 |
| TraesCS4A01G263800.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 47.7 | 46.77 |
| TraesCS4B01G051200.1 | Wheat | nucleus | 47.53 | 46.76 |
| CDY17313 | Canola | cytosol | 44.9 | 46.67 |
| CDY19902 | Canola | cytosol | 44.9 | 46.67 |
| TraesCS4D01G051300.1 | Wheat | cytosol | 45.23 | 46.53 |
| CDX89305 | Canola | cytosol | 43.09 | 46.05 |
| EER90980 | Sorghum | cytosol | 47.7 | 45.81 |
| CDY14300 | Canola | nucleus | 43.42 | 45.36 |
| CDY20777 | Canola | cytosol | 43.91 | 45.33 |
| CDY06596 | Canola | cytosol | 43.59 | 44.99 |
| CDY36737 | Canola | nucleus | 45.07 | 43.49 |
| CDY12006 | Canola | cytosol | 44.57 | 42.08 |
| HORVU4Hr1G008440.3 | Barley | nucleus | 47.37 | 40.74 |
| CDY18372 | Canola | nucleus | 39.14 | 40.34 |
| CDX93308 | Canola | nucleus | 38.82 | 40.07 |
| CDX86911 | Canola | nucleus | 35.36 | 39.89 |
| CDY00270 | Canola | nucleus | 35.2 | 39.7 |
| CDY09401 | Canola | endoplasmic reticulum, golgi, plasma membrane | 37.01 | 39.54 |
| CDX94287 | Canola | nucleus | 42.11 | 38.67 |
| CDX87240 | Canola | nucleus | 34.21 | 38.45 |
| CDY16786 | Canola | nucleus | 33.72 | 37.75 |
| CDX84899 | Canola | extracellular, nucleus, plastid | 34.05 | 36.06 |
| CDX89081 | Canola | cytosol | 40.46 | 35.86 |
| CDY62713 | Canola | cytosol | 40.13 | 35.67 |
| GSMUA_Achr2P21660_001 | Banana | endoplasmic reticulum, extracellular | 55.59 | 35.65 |
| CDY27637 | Canola | cytosol | 33.39 | 35.61 |
| CDX97365 | Canola | nucleus | 43.75 | 32.84 |
| Zm00001d033794_P001 | Maize | nucleus | 47.04 | 28.32 |
Protein Annotations
| Gene3D:1.20.58.1520 | MapMan:35.1 | GO:A0A078FWY9 | UniProt:A0A078FWY9 | EnsemblPlants:CDY17624 | ProteinID:CDY17624 |
| ProteinID:CDY17624.1 | ncoils:Coil | GO:GO:0000226 | GO:GO:0000910 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0007049 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| EnsemblPlantsGene:GSBRNA2T00001837001 | InterPro:MAP65_Ase1_PRC1 | PFAM:PF03999 | PANTHER:PTHR19321 | PANTHER:PTHR19321:SF5 | UniParc:UPI0004EF04B7 |
| SEG:seg | : | : | : | : | : |
Description
BnaA06g34430DBnaA06g34430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWY9]
Coordinates
chrLK032076:-:191323..194621
Molecular Weight (calculated)
69380.4 Da
IEP (calculated)
7.100
GRAVY (calculated)
-0.698
Length
608 amino acids
Sequence
(BLAST)
(BLAST)
001: MLQVGSSNAL FFQTNTTCNN LLRELQQIWV EIGESEAEKD KMLMELEKEC LQIYQRKVDE AANSKARLHQ SVAAMEAEVA SLMAALGVLN INSPIKVDKS
101: SKSLKEKLAA VTPLVEELRI QKEERMKQFS DIKAQIEKIS GEISGYSEHL NKGMISSLTL EEQDLTLRKL NEYQTHLRTL QKEKSDRLNK VLGYVNEVHT
201: LCGVLGVDFS QTVCEVHPSL HRTDHEQSTN ISDNTLEGLD NMIQKLKTER RARFQKLKDV VASLFELWNL MDTPQEERTK FGRVTYVVRS SESSITEPGI
301: LSTETIEQVS AEVESLSKLK ASKMKELVMK RRSELEDLCR LTHIQPDTST SAEKSSALID SGLVDPSELL ANIEMQINKI KDEAQSRKDI MDRIDRWLSA
401: CEEENWLEEY NLDENRYSAG RGGHVNLKRA ERARVTINKI PAMVDNLIKK TLAWEEETQK SFLYDGVRLV NILEDYKLTR KQQEEEKKRY RDQKKRQDLL
501: LTQRESIYGS KPSPRRSSSF RKPNGYSISN GNGSMPPTPR RSSVGTTTPD LLLTPRSYSG HHRQNGYFKE VRRLTSTPLN YVAIQKEDTA STTYTSIYSS
601: EPDSPLQG
101: SKSLKEKLAA VTPLVEELRI QKEERMKQFS DIKAQIEKIS GEISGYSEHL NKGMISSLTL EEQDLTLRKL NEYQTHLRTL QKEKSDRLNK VLGYVNEVHT
201: LCGVLGVDFS QTVCEVHPSL HRTDHEQSTN ISDNTLEGLD NMIQKLKTER RARFQKLKDV VASLFELWNL MDTPQEERTK FGRVTYVVRS SESSITEPGI
301: LSTETIEQVS AEVESLSKLK ASKMKELVMK RRSELEDLCR LTHIQPDTST SAEKSSALID SGLVDPSELL ANIEMQINKI KDEAQSRKDI MDRIDRWLSA
401: CEEENWLEEY NLDENRYSAG RGGHVNLKRA ERARVTINKI PAMVDNLIKK TLAWEEETQK SFLYDGVRLV NILEDYKLTR KQQEEEKKRY RDQKKRQDLL
501: LTQRESIYGS KPSPRRSSSF RKPNGYSISN GNGSMPPTPR RSSVGTTTPD LLLTPRSYSG HHRQNGYFKE VRRLTSTPLN YVAIQKEDTA STTYTSIYSS
601: EPDSPLQG
001: MLEIGSPNAL FFRTNTTCNN LLRELQKIWV EIGETETEKD RMLMELEREC LQIYQRKVDE AANSKAKLHQ SVASIEAEVA SLMAALGVLN INSPIKLDKG
101: SKSLKEKLAA VTPLVEELRI QKEERMKQFS DIKAQIEKIS GEISGYSDHL NKAMNISLTL EEQDLTLRNL NEYQTHLRTL QKEKSDRLNK VLGYVNEVHA
201: LCGVLGVDFS QTVSAVHPSL HRTDQEQSTN ISDSTLEGLE HMIQKLKTER KSRFQKLKDV VASLFELWNL MDTPQEDRTK FGKVTYVVRS SEANITEPGI
301: LSTETIEQVS TEVDSLSKLK ASRMKELVMK RRSELEDLCR LTHIQPDTST SAEKSTALID SGLVDPSELL ANIEMQINKI KDEAQSRKDI MDRIDRWLSA
401: CEEENWLEEY NLDENRYSAG RGGHVNLKRA ERARVTINKI PGMVDTLIKK TLVWEEDMQK SFLYDGVRLV NILEDYKLTR KQQEEEKKRY RDQKKRQDLL
501: LTQRESIYGS KPSPRRSSSF RKPNGFNISN GNGSVPPTPR RGSVGTTTPD VLLTPRSYSG HHRQNGYFKE VRRLSTTPLN YVAMQKEDTV STTYTSIYSS
601: EPDSPLQG
101: SKSLKEKLAA VTPLVEELRI QKEERMKQFS DIKAQIEKIS GEISGYSDHL NKAMNISLTL EEQDLTLRNL NEYQTHLRTL QKEKSDRLNK VLGYVNEVHA
201: LCGVLGVDFS QTVSAVHPSL HRTDQEQSTN ISDSTLEGLE HMIQKLKTER KSRFQKLKDV VASLFELWNL MDTPQEDRTK FGKVTYVVRS SEANITEPGI
301: LSTETIEQVS TEVDSLSKLK ASRMKELVMK RRSELEDLCR LTHIQPDTST SAEKSTALID SGLVDPSELL ANIEMQINKI KDEAQSRKDI MDRIDRWLSA
401: CEEENWLEEY NLDENRYSAG RGGHVNLKRA ERARVTINKI PGMVDTLIKK TLVWEEDMQK SFLYDGVRLV NILEDYKLTR KQQEEEKKRY RDQKKRQDLL
501: LTQRESIYGS KPSPRRSSSF RKPNGFNISN GNGSVPPTPR RGSVGTTTPD VLLTPRSYSG HHRQNGYFKE VRRLSTTPLN YVAMQKEDTV STTYTSIYSS
601: EPDSPLQG
Arabidopsis Description
MAP65-665-kDa microtubule-associated protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIS3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.