CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028363_P001	Maize	cytosol	95.58	95.58
Os03t0237600-04	Rice	nucleus	87.07	87.21
TraesCS4B01G230500.2	Wheat	nucleus	85.92	85.92
TraesCS4D01G231800.3	Wheat	nucleus	85.76	85.76
TraesCS4A01G074200.2	Wheat	nucleus	85.11	85.11
HORVU4Hr1G064580.2	Barley	endoplasmic reticulum, nucleus, plastid	85.92	72.71
GSMUA_Achr10P...	Banana	nucleus	60.23	60.93
EER98994	Sorghum	nucleus	58.59	60.07
KRH09582	Soybean	cytosol, mitochondrion, nucleus	14.73	59.6
VIT_01s0011g06330.t01	Wine grape	nucleus	57.94	59.1
KRH40910	Soybean	cytosol, mitochondrion, nucleus	56.96	57.9
KRG89099	Soybean	cytosol	56.79	57.74
KRH46955	Soybean	cytosol	26.19	56.54
PGSC0003DMT400058659	Potato	cytosol, plastid	54.83	55.74
PGSC0003DMT400075869	Potato	nucleus	54.5	55.59
Solyc04g008290.2.1	Tomato	nucleus	54.5	55.5
Solyc01g005080.2.1	Tomato	cytosol	50.74	55.46
CDY17624	Canola	nucleus	54.83	55.1
Bra024843.1-P	Field mustard	nucleus	54.66	54.93
GSMUA_Achr6P05980_001	Banana	cytosol	53.36	54.79
Bra026811.1-P	Field mustard	cytosol, nucleus, plastid	52.86	54.29
CDY33748	Canola	cytosol	52.86	54.1
CDY15798	Canola	endoplasmic reticulum, golgi	37.32	54.03
AT1G14690.1	Thale cress	cytosol	53.19	53.9
CDX81663	Canola	cytosol	52.54	53.68
AT2G01910.1	Thale cress	nucleus	53.36	53.62
KRH01846	Soybean	extracellular	29.95	52.89
CDY03090	Canola	nucleus	52.86	52.01
EER90980	Sorghum	cytosol	49.43	47.71
EER88641	Sorghum	cytosol	42.23	44.48
EER89674	Sorghum	cytosol	41.08	42.4
KXG21994	Sorghum	cytosol	36.66	39.16
EES15312	Sorghum	cytosol	36.5	37.73
GSMUA_Achr2P21660_001	Banana	endoplasmic reticulum, extracellular	56.14	36.18
OQU87349	Sorghum	golgi, vacuole	40.26	34.41
Bra026625.1-P	Field mustard	mitochondrion	20.46	32.55
EES06214	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.77	32.14
CDY09401	Canola	endoplasmic reticulum, golgi, plasma membrane	24.22	26.01
EES11428	Sorghum	nucleus	11.29	23.96
OQU77968	Sorghum	cytosol	11.95	19.89

Protein Annotations

Gene3D:1.20.58.1520	MapMan:35.1	EntrezGene:8056829	UniProt:C5WRL9	ncoils:Coil	EnsemblPlants:EER92583
ProteinID:EER92583	ProteinID:EER92583.1	GO:GO:0000226	GO:GO:0000910	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
InterPro:MAP65_Ase1_PRC1	ProteinID:OQU92941.1	PFAM:PF03999	PANTHER:PTHR19321	PANTHER:PTHR19321:SF12	EnsemblPlantsGene:SORBI_3001G442800
unigene:Sbi.1946	UniParc:UPI0001A82735	RefSeq:XP_002465585.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:72024196..72029827

Molecular Weight (calculated)

69715.1 Da

IEP (calculated)

6.640

GRAVY (calculated)

-0.649

Length

611 amino acids

Sequence
(BLAST)

001: MGEMVVAGYG MDKALRASVS FDTPCGALLR ELEQIWTEIG EREQDKDRMF LELETECMRV YRRKVDSANA ERAQLRQSLM AKEAELKALV ASIGENGPRF
101: TVDEKHTSLK DQLAAVTPLL EDLRAKKQDR IKQISNVQSQ IEKIKAQISD HNYQDSDGSV KQLNDDHDLS TRRISDLQMQ LRNLQKEKSD RLQKVFIYVD
201: EVHCLCAVLG MDFAKTVKEV HPSLHGANSE NSTNISDKTL EGLTQTILKL KAEKKTRVLK LQETVEKLHK LWNLMESTEQ ERIHFSEVAA VLGSTEEEIN
301: SPGILSLETI QETEEEVERL TIQKASRMKE LVLKKRLELE VICRNAHMEP DMSTAPEKII ALIDSGLVDP CELLSSVEVQ ITKANEESLT RKDIMERVDK
401: WLSACDEETW LEEYNQDDNR YSAGRGAHLN LKRAEKARIT VQKIPTMIDN LIAKTFAWED ERNVPFLYDG VRLVAILEEQ KLRRAQREED RRRCRDQKKL
501: HSLLLKEKEL IFGSKPSPKK TSSFNRRTSN HHPNANGTGF MTPVPRRVSA GSATPELLTP RSYSGRYNNY FKENRRLTTA PLNFSVGSKE DSMSSFASIS
601: GSEPDSPLFL H

Best Arabidopsis Sequence Match ( AT1G14690.1 )
(BLAST)

001: MLEIESPTSL CFRTNTTCNA LLRELQKIWV DIGESDAEKD RMLMELEKEC LEIYRRKVDE AANSKAQLHQ SLVSIEAEIA SLLAALGVFN SHSPMKAKEG
101: SKSLKEKLAA VRPMLEDLRL QKDERMKQFV DIKAQIEKMS GEISGYSDQL NKTMVGSLAL DEQDLTLRKL NEYQTHLRSL QKEKSDRLNK VLDYVNEVHT
201: LCGVLGVDFG QTVSEVHPSL HRTDHEQSTN ISDDTLDGLH HMIHKLKTER SVRFQKLKDV AGSLFELWNL MDTSQEERTK FASVSYVVRS SESDITEPNI
301: LSSETIEQVS AEVDCFNKLK ASRMKELVMK RRTELENLCR LAHIEADTST SLEKSTALID SGLVDPSELL TNIELHINKI KEEAHSRKEI IDRIDRWLSA
401: CEEENWLEEY NQDETRYSAG RGGHVNLKHA ERARITVNKI PSMVDNLIKK TLLWEDETRK SFLYDGVRLV SILEDYKLTR KQQEEEKRRY RDQKKMQDLL
501: IKRRESIYGS KPSPRRSNSV RKTNGYNGDA SVPPTPRRNS AGATNNDIMT TPRSYSSHRQ NGYFKEVRRL STAPLNFVAI PKEDSVSTYT SVCGSEPDSP
601: LYN

Arabidopsis Description

MAP65-765-kDa microtubule-associated protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L836]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.