CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003920_P001	Maize	cytosol	20.45	84.78
Zm00001d004213_P001	Maize	cytosol	22.2	84.11
Zm00001d007926_P001	Maize	cytosol	23.25	83.12
Zm00001d038174_P002	Maize	cytosol	87.76	81.89
TraesCS1B01G267200.2	Wheat	cytosol	75.7	75.17
TraesCS1D01G256000.1	Wheat	cytosol	69.58	73.98
TraesCS1A01G256800.1	Wheat	nucleus	74.48	73.96
Os05t0409400-01	Rice	cytosol, nucleus, plastid	74.13	70.2
HORVU1Hr1G063330.5	Barley	golgi	75.17	67.82
GSMUA_Achr9P17360_001	Banana	cytosol	59.09	58.18
VIT_13s0084g00080.t01	Wine grape	cytosol, nucleus, plastid	54.72	55.69
PGSC0003DMT400008510	Potato	plastid	44.93	51.3
KRH20613	Soybean	cytosol	50.35	50.79
Solyc01g096680.2.1	Tomato	nucleus	49.3	49.56
AT2G38720.1	Thale cress	nucleus	46.85	48.73
Bra017106.1-P	Field mustard	nucleus	45.98	47.91
CDX93308	Canola	nucleus	45.98	44.65
CDY18372	Canola	nucleus	45.98	44.58
EER88641	Sorghum	cytosol	43.36	42.76
EER89674	Sorghum	cytosol	44.06	42.57
EER98994	Sorghum	nucleus	38.46	36.91
EER92583	Sorghum	cytosol	39.16	36.66
EES15312	Sorghum	cytosol	36.71	35.53
EES06214	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	34.97	34.19
EER90980	Sorghum	cytosol	36.71	33.18
OQU87349	Sorghum	golgi, vacuole	41.26	33.01
EES11428	Sorghum	nucleus	11.89	23.61
OQU77968	Sorghum	cytosol	13.99	21.8

Protein Annotations

Gene3D:1.20.58.1520	MapMan:35.1	UniProt:A0A1B6P8E8	ncoils:Coil	GO:GO:0000226	GO:GO:0000910
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	EnsemblPlants:KXG21994	ProteinID:KXG21994	ProteinID:KXG21994.1	InterPro:MAP65_Ase1_PRC1
PFAM:PF03999	PANTHER:PTHR19321	PANTHER:PTHR19321:SF4	EnsemblPlantsGene:SORBI_3009G136000	UniParc:UPI00081AB6FB	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:49145554..49151225

Molecular Weight (calculated)

65267.6 Da

IEP (calculated)

8.276

GRAVY (calculated)

-0.710

Length

572 amino acids

Sequence
(BLAST)

001: MATPPPPPMP PMRVSCGSLL QELQGLWGEI GQDEMERDRM ILELEEDCRN VYRQKVNQTR KQKADLLQEL SFGKADIDKI LSALGERETF PRSEKLGGTL
101: MEQLAKIEPV LEDLRRRRDD RVNEFRAIQL QIVRLQAEIS GVIDHGDPAA PMVDENDLSL KRLGELKEQL NDLQKEKECR LQKIDIQTNS IQEMCSIMSI
201: DLKVALKDVH PSYAELGRSK PMSISNSSLD RLSEKVHALN HEKKQRLRKL QDLGSTLIEL WNLMDTPIDE QRSFDHVTSL IKVSPNTVMP PGCLAHELIE
301: KAENEVKRLT HLKASKMKEL VFKKMTDLEE IYRSVHMDIN GDSERRALSD LIDSGRADLS ELLTRMDIQI AEAKEHALSR KDILEKVEKW TSASEEETWL
401: DEYERDQNRY NAGRGAHINL KRAEKARTLV SKLPSLVENL TAKIIAWEKE KGMPFMFNKV RLLHCLEEYT CTRQQKEEEK RRSRELKKLQ EQSGTEQGAK
501: FVTKPSPIRP LSARKPLGSS NVNNIGGTLT GRRISTPMSR KGRPSSGRVQ EAGKTAVTPA NYVALPKDQQ TM

Best Arabidopsis Sequence Match ( AT5G55230.1 )
(BLAST)

001: MAVTDTESPH LGEITCGTLL EKLQEIWDEV GESDDERDKL LLQIEQECLD VYKRKVEQAA KSRAELLQTL SDANAELSSL TMSLGDKSLV GIPDKSSGTI
101: KEQLAAIAPA LEQLWQQKEE RVREFSDVQS QIQKICGDIA GGLSNEVPIV DESDLSLKKL DDFQSQLQEL QKEKSDRLRK VLEFVSTVHD LCAVLGLDFL
201: STVTEVHPSL DEDTSVQSKS ISNETLSRLA KTVLTLKDDK KQRLQKLQEL ATQLIDLWNL MDTPDEEREL FDHVTCNISS SVDEVTVPGA LARDLIEQAE
301: VEVDRLDQLK ASRMKEIAFK KQSELEEIYA RAHVEVNPES ARERIMSLID SGNVEPTELL ADMDSQISKA KEEAFSRKDI LDRVEKWMSA CEEESWLEDY
401: NRDQNRYSAS RGAHLNLKRA EKARILVSKI PAMVDTLVAK TRAWEEEHSM SFAYDGVPLL AMLDEYGMLR QEREEEKRRL REQKKVQEQP HVEQESAFST
501: RPSPARPVSA KKTVGPRANN GGANGTHNRR LSLNANQNGS RSTAKEAGRR ETLNRPAAPT NYVAISKEEA ASSPVSGAAD HQVPASP

Arabidopsis Description

ATMAP65-1Microtubule-associated proteins 65-1 [Source:UniProtKB/TrEMBL;Acc:F4K3E4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.