CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	extracellular, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	extracellular
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020685_P002	Maize	cytosol	92.95	86.16
TraesCS5D01G240800.1	Wheat	nucleus	83.56	84.55
TraesCS5A01G233900.1	Wheat	nucleus	82.72	84.13
TraesCS5B01G232400.1	Wheat	nucleus	82.55	83.53
Os09t0450300-01	Rice	nucleus	81.21	81.34
VIT_01s0011g06330.t01	Wine grape	nucleus	61.07	60.77
KRH09582	Soybean	cytosol, mitochondrion, nucleus	14.93	58.94
EER92583	Sorghum	cytosol	60.07	58.59
Solyc01g005080.2.1	Tomato	cytosol	54.53	58.14
KRH46955	Soybean	cytosol	27.52	57.95
KRH40910	Soybean	cytosol, mitochondrion, nucleus	58.39	57.9
PGSC0003DMT400075869	Potato	nucleus	58.05	57.76
KRG89099	Soybean	cytosol	58.22	57.74
Solyc04g008290.2.1	Tomato	nucleus	58.05	57.67
CDY17624	Canola	nucleus	58.39	57.24
Bra024843.1-P	Field mustard	nucleus	58.22	57.07
PGSC0003DMT400058659	Potato	cytosol, plastid	57.38	56.91
KRH01846	Soybean	extracellular	32.72	56.36
AT2G01910.1	Thale cress	nucleus	57.05	55.92
AT1G14690.1	Thale cress	cytosol	55.54	54.89
Bra026811.1-P	Field mustard	cytosol, nucleus, plastid	54.7	54.79
CDY33748	Canola	cytosol	54.53	54.44
CDX81663	Canola	cytosol	54.53	54.35
CDY03090	Canola	nucleus	56.38	54.11
CDY15798	Canola	endoplasmic reticulum, golgi	37.25	52.61
EER90980	Sorghum	cytosol	47.82	45.02
EER88641	Sorghum	cytosol	43.29	44.48
EER89674	Sorghum	cytosol	42.79	43.07
KXG21994	Sorghum	cytosol	36.91	38.46
EES15312	Sorghum	cytosol	35.23	35.53
OQU87349	Sorghum	golgi, vacuole	41.28	34.41
EES06214	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.38	32.99
Bra026625.1-P	Field mustard	mitochondrion	20.3	31.51
CDY09401	Canola	endoplasmic reticulum, golgi, plasma membrane	24.66	25.83
EES11428	Sorghum	nucleus	11.07	22.92
OQU77968	Sorghum	cytosol	11.74	19.07

Protein Annotations

Gene3D:1.20.58.1520	MapMan:35.1	EntrezGene:8081031	UniProt:C5X272	ncoils:Coil	EnsemblPlants:EER98994
ProteinID:EER98994	ProteinID:EER98994.1	GO:GO:0000226	GO:GO:0000910	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
InterPro:MAP65_Ase1_PRC1	PFAM:PF03999	PANTHER:PTHR19321	PANTHER:PTHR19321:SF5	EnsemblPlantsGene:SORBI_3002G221700	unigene:Sbi.14800
UniParc:UPI0001A84124	RefSeq:XP_002462473.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:61350537..61355566

Molecular Weight (calculated)

67335.3 Da

IEP (calculated)

8.269

GRAVY (calculated)

-0.656

Length

596 amino acids

Sequence
(BLAST)

001: MVGVGAGLGL GMEGPSCGAL LRELQQIWAE VGESEAEKNK ALLDIERECL EVYRRKVDDA NRTRVQLHQS VAAKEAEVAS LMATLGEHKL YLKKDKGVVP
101: LKEQLAAVIP VLENLKCKKE ERVKQFSDIR SQIEKIRFEL SEHNDQGGNV SSLAAEEHDL STRKLNSYQA QLRALQKDKS ERLRKVLEYI NEVHSLCGVL
201: GIDFGSTVHE VHPSLHQNGI EQSRNISNST LEGLATTIYK LKAERKSRIH KVRETMESLC QLWKLMDSPE EEKRQFSKVM SILILPEEGI TSPGVLSKDT
301: IDKMEAEVER LTKLKTSRLK EIVMKRRAEL EEICQNAHIE PDVSTAPEQT DALIDSGLID PSELLANIES QILKAKEESL SRKDIMDRIN KWIAACDEDA
401: WLQEYNQDPK RYSAGRGAHI NLKRAEKARI LVRKIPSMVD NLINRTFAWE NARNKPFLYD GGRLISVLEE YRLHRQQKEE ENRRYRDQKK LESILLAEKE
501: AIFGSKPSPK RTSSLSRKTN GYRPNGNTNG LKTPTPRRSS LGSATPELLT PRSYSGHNRY FGDLSRLSTS HLNFGDDSLS TFTSISGSEP ESPSIG

Best Arabidopsis Sequence Match ( AT2G01910.1 )
(BLAST)

001: MLEIGSPNAL FFRTNTTCNN LLRELQKIWV EIGETETEKD RMLMELEREC LQIYQRKVDE AANSKAKLHQ SVASIEAEVA SLMAALGVLN INSPIKLDKG
101: SKSLKEKLAA VTPLVEELRI QKEERMKQFS DIKAQIEKIS GEISGYSDHL NKAMNISLTL EEQDLTLRNL NEYQTHLRTL QKEKSDRLNK VLGYVNEVHA
201: LCGVLGVDFS QTVSAVHPSL HRTDQEQSTN ISDSTLEGLE HMIQKLKTER KSRFQKLKDV VASLFELWNL MDTPQEDRTK FGKVTYVVRS SEANITEPGI
301: LSTETIEQVS TEVDSLSKLK ASRMKELVMK RRSELEDLCR LTHIQPDTST SAEKSTALID SGLVDPSELL ANIEMQINKI KDEAQSRKDI MDRIDRWLSA
401: CEEENWLEEY NLDENRYSAG RGGHVNLKRA ERARVTINKI PGMVDTLIKK TLVWEEDMQK SFLYDGVRLV NILEDYKLTR KQQEEEKKRY RDQKKRQDLL
501: LTQRESIYGS KPSPRRSSSF RKPNGFNISN GNGSVPPTPR RGSVGTTTPD VLLTPRSYSG HHRQNGYFKE VRRLSTTPLN YVAMQKEDTV STTYTSIYSS
601: EPDSPLQG

Arabidopsis Description

MAP65-665-kDa microtubule-associated protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIS3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.