Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33748 | Canola | cytosol | 95.99 | 96.15 |
| AT1G14690.1 | Thale cress | cytosol | 87.12 | 86.4 |
| CDY17624 | Canola | nucleus | 80.77 | 79.44 |
| CDY03090 | Canola | nucleus | 78.09 | 75.2 |
| CDY15798 | Canola | endoplasmic reticulum, golgi | 51.84 | 73.46 |
| VIT_01s0011g06330.t01 | Wine grape | nucleus | 68.73 | 68.61 |
| KRH40910 | Soybean | cytosol, mitochondrion, nucleus | 66.39 | 66.06 |
| KRG89099 | Soybean | cytosol | 66.22 | 65.89 |
| PGSC0003DMT400075869 | Potato | nucleus | 63.21 | 63.11 |
| KRH09582 | Soybean | cytosol, mitochondrion, nucleus | 15.89 | 62.91 |
| Solyc04g008290.2.1 | Tomato | nucleus | 62.71 | 62.5 |
| Solyc01g005080.2.1 | Tomato | cytosol | 58.03 | 62.08 |
| PGSC0003DMT400058659 | Potato | cytosol, plastid | 62.21 | 61.9 |
| GSMUA_Achr6P23030_001 | Banana | cytosol | 57.19 | 60.85 |
| KRH46955 | Soybean | cytosol | 28.43 | 60.07 |
| KRH01846 | Soybean | extracellular | 33.95 | 58.67 |
| GSMUA_Achr10P... | Banana | nucleus | 59.03 | 58.44 |
| GSMUA_Achr6P04350_001 | Banana | cytosol | 58.19 | 55.24 |
| Os09t0450300-01 | Rice | nucleus | 54.68 | 54.96 |
| EER98994 | Sorghum | nucleus | 54.35 | 54.53 |
| TraesCS4A01G074200.2 | Wheat | nucleus | 55.35 | 54.17 |
| TraesCS5D01G240800.1 | Wheat | nucleus | 53.01 | 53.82 |
| TraesCS4B01G230500.2 | Wheat | nucleus | 54.85 | 53.68 |
| TraesCS5A01G233900.1 | Wheat | nucleus | 52.51 | 53.58 |
| TraesCS4D01G231800.3 | Wheat | nucleus | 54.68 | 53.52 |
| GSMUA_Achr6P05980_001 | Banana | cytosol | 53.18 | 53.45 |
| TraesCS5B01G232400.1 | Wheat | nucleus | 52.51 | 53.31 |
| Os03t0237600-04 | Rice | nucleus | 54.01 | 52.95 |
| EER92583 | Sorghum | cytosol | 53.68 | 52.54 |
| Zm00001d028363_P001 | Maize | cytosol | 53.68 | 52.54 |
| Zm00001d020685_P002 | Maize | cytosol | 55.18 | 51.32 |
| Os03t0719000-01 | Rice | cytosol, nucleus | 36.45 | 46.19 |
| CDY19902 | Canola | cytosol | 44.98 | 45.98 |
| CDY17313 | Canola | cytosol | 44.82 | 45.81 |
| HORVU4Hr1G064580.2 | Barley | endoplasmic reticulum, nucleus, plastid | 54.85 | 45.43 |
| CDX89305 | Canola | cytosol | 43.14 | 45.34 |
| CDY20777 | Canola | cytosol | 44.31 | 44.99 |
| CDY14300 | Canola | nucleus | 43.48 | 44.67 |
| CDY06596 | Canola | cytosol | 43.65 | 44.31 |
| EER90980 | Sorghum | cytosol | 45.82 | 43.29 |
| CDY36737 | Canola | nucleus | 45.15 | 42.86 |
| TraesCS4A01G263800.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 44.15 | 42.58 |
| TraesCS4D01G051300.1 | Wheat | cytosol | 41.81 | 42.3 |
| TraesCS4B01G051200.1 | Wheat | nucleus | 43.65 | 42.23 |
| CDY12006 | Canola | cytosol | 44.65 | 41.46 |
| CDX86911 | Canola | nucleus | 35.79 | 39.7 |
| CDY00270 | Canola | nucleus | 35.45 | 39.33 |
| CDY18372 | Canola | nucleus | 38.29 | 38.81 |
| CDX93308 | Canola | nucleus | 38.13 | 38.71 |
| CDX94287 | Canola | nucleus | 42.47 | 38.37 |
| CDX87240 | Canola | nucleus | 34.45 | 38.08 |
| CDY16786 | Canola | nucleus | 34.45 | 37.94 |
| HORVU4Hr1G008440.3 | Barley | nucleus | 44.15 | 37.34 |
| CDY09401 | Canola | endoplasmic reticulum, golgi, plasma membrane | 34.45 | 36.2 |
| CDX84899 | Canola | extracellular, nucleus, plastid | 34.45 | 35.89 |
| CDY27637 | Canola | cytosol | 33.78 | 35.44 |
| GSMUA_Achr2P21660_001 | Banana | endoplasmic reticulum, extracellular | 54.52 | 34.39 |
| CDX89081 | Canola | cytosol | 38.96 | 33.97 |
| CDY62713 | Canola | cytosol | 38.63 | 33.77 |
| CDX97365 | Canola | nucleus | 43.98 | 32.47 |
| Zm00001d033794_P001 | Maize | nucleus | 45.48 | 26.93 |
Protein Annotations
| EnsemblPlants:CDX81663 | EnsemblPlantsGene:GSBRNA2T00136581001 | Gene3D:1.20.58.1520 | GO:A0A078D2Y0 | GO:GO:0000226 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 |
| InterPro:MAP65_Ase1_PRC1 | ncoils:Coil | PANTHER:PTHR19321 | PANTHER:PTHR19321:SF5 | PFAM:PF03999 | ProteinID:CDX81663 |
| ProteinID:CDX81663.1 | SEG:seg | UniParc:UPI0004EE1A5A | MapMan:35.1 | : | : |
Description
BnaC08g39380D
Coordinates
chrLK031826:-:249540..252861
Molecular Weight (calculated)
68509.6 Da
IEP (calculated)
6.995
GRAVY (calculated)
-0.692
Length
598 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEIGSPTSL FFRTNTTCNA LLQELQQKIW VDIGESDAEK DRMLMELEKE CLEIYRRKVD EAANSKAQLH QSLVSIEAEI ASIMAALGVL NIHSPIKEKG
101: SSKSLKEKLA YVRPLLEDLR LQKEERVKQF VDVKAQIEKM SGEISGYSGM IGSLTLDDDQ DLTLRKLNEY QTHLRSLQKE KADRLNKVLD YVNEVHALCG
201: VLGVDFCQTV SEVHPSLHRT NHEQSTNISD ETLDGLKQMI EKLKTERRLR LQKLKDVVGS LFDLWNLMDT PQEERMRFAR VSCVVRSSES DVTEPNILST
301: ETIEQVSAEV DRFNKLKSSR MKELVMKRRS ELENLCRLAH IEPDTSTSLE KSTALIDSGL VDPSELLANI EAQIKRIKEE AQSRKEIIDR IDRWLSACEE
401: ENWLEEYNQD ENRYSAGRGG HVNLKHAERA RVTVNKIPSM VDNLIKKTLL WEEQTQKSFL YDGVRLVSIL EDYKLTRKQQ EEEKKRYRDQ KKMQDLLLNR
501: RESIYGSKPS PRRSNSIRKA NGYSGNVSMP PTPRRNSAGA ANSDVMMTPR SYSGHHGQNG YFKEVRKLST APLNFVAIPK EDSASTYTYS EPDSPLHN
101: SSKSLKEKLA YVRPLLEDLR LQKEERVKQF VDVKAQIEKM SGEISGYSGM IGSLTLDDDQ DLTLRKLNEY QTHLRSLQKE KADRLNKVLD YVNEVHALCG
201: VLGVDFCQTV SEVHPSLHRT NHEQSTNISD ETLDGLKQMI EKLKTERRLR LQKLKDVVGS LFDLWNLMDT PQEERMRFAR VSCVVRSSES DVTEPNILST
301: ETIEQVSAEV DRFNKLKSSR MKELVMKRRS ELENLCRLAH IEPDTSTSLE KSTALIDSGL VDPSELLANI EAQIKRIKEE AQSRKEIIDR IDRWLSACEE
401: ENWLEEYNQD ENRYSAGRGG HVNLKHAERA RVTVNKIPSM VDNLIKKTLL WEEQTQKSFL YDGVRLVSIL EDYKLTRKQQ EEEKKRYRDQ KKMQDLLLNR
501: RESIYGSKPS PRRSNSIRKA NGYSGNVSMP PTPRRNSAGA ANSDVMMTPR SYSGHHGQNG YFKEVRKLST APLNFVAIPK EDSASTYTYS EPDSPLHN
001: MLEIESPTSL CFRTNTTCNA LLRELQKIWV DIGESDAEKD RMLMELEKEC LEIYRRKVDE AANSKAQLHQ SLVSIEAEIA SLLAALGVFN SHSPMKAKEG
101: SKSLKEKLAA VRPMLEDLRL QKDERMKQFV DIKAQIEKMS GEISGYSDQL NKTMVGSLAL DEQDLTLRKL NEYQTHLRSL QKEKSDRLNK VLDYVNEVHT
201: LCGVLGVDFG QTVSEVHPSL HRTDHEQSTN ISDDTLDGLH HMIHKLKTER SVRFQKLKDV AGSLFELWNL MDTSQEERTK FASVSYVVRS SESDITEPNI
301: LSSETIEQVS AEVDCFNKLK ASRMKELVMK RRTELENLCR LAHIEADTST SLEKSTALID SGLVDPSELL TNIELHINKI KEEAHSRKEI IDRIDRWLSA
401: CEEENWLEEY NQDETRYSAG RGGHVNLKHA ERARITVNKI PSMVDNLIKK TLLWEDETRK SFLYDGVRLV SILEDYKLTR KQQEEEKRRY RDQKKMQDLL
501: IKRRESIYGS KPSPRRSNSV RKTNGYNGDA SVPPTPRRNS AGATNNDIMT TPRSYSSHRQ NGYFKEVRRL STAPLNFVAI PKEDSVSTYT SVCGSEPDSP
601: LYN
101: SKSLKEKLAA VRPMLEDLRL QKDERMKQFV DIKAQIEKMS GEISGYSDQL NKTMVGSLAL DEQDLTLRKL NEYQTHLRSL QKEKSDRLNK VLDYVNEVHT
201: LCGVLGVDFG QTVSEVHPSL HRTDHEQSTN ISDDTLDGLH HMIHKLKTER SVRFQKLKDV AGSLFELWNL MDTSQEERTK FASVSYVVRS SESDITEPNI
301: LSSETIEQVS AEVDCFNKLK ASRMKELVMK RRTELENLCR LAHIEADTST SLEKSTALID SGLVDPSELL TNIELHINKI KEEAHSRKEI IDRIDRWLSA
401: CEEENWLEEY NQDETRYSAG RGGHVNLKHA ERARITVNKI PSMVDNLIKK TLLWEDETRK SFLYDGVRLV SILEDYKLTR KQQEEEKRRY RDQKKMQDLL
501: IKRRESIYGS KPSPRRSNSV RKTNGYNGDA SVPPTPRRNS AGATNNDIMT TPRSYSSHRQ NGYFKEVRRL STAPLNFVAI PKEDSVSTYT SVCGSEPDSP
601: LYN
Arabidopsis Description
MAP65-765-kDa microtubule-associated protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L836]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.