Factsheet for GSMUA_Achr6P23030_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P04350_001	Banana	cytosol	76.87	68.57
KRH09582	Soybean	cytosol, mitochondrion, nucleus	16.9	62.91
VIT_01s0011g06330.t01	Wine grape	nucleus	66.01	61.94
GSMUA_Achr10P...	Banana	nucleus	65.84	61.26
Solyc01g005080.2.1	Tomato	cytosol	60.14	60.47
CDY17624	Canola	nucleus	63.35	58.55
GSMUA_Achr6P05980_001	Banana	cytosol	61.92	58.49
Bra024843.1-P	Field mustard	nucleus	63.17	58.39
KRH40910	Soybean	cytosol, mitochondrion, nucleus	62.28	58.24
KRG89099	Soybean	cytosol	62.28	58.24
CDX81663	Canola	cytosol	60.85	57.19
Bra026811.1-P	Field mustard	cytosol, nucleus, plastid	60.5	57.14
CDY33748	Canola	cytosol	60.32	56.78
PGSC0003DMT400075869	Potato	nucleus	60.5	56.76
AT1G14690.1	Thale cress	cytosol	60.85	56.72
AT2G01910.1	Thale cress	nucleus	61.21	56.58
PGSC0003DMT400058659	Potato	cytosol, plastid	60.5	56.57
KRH46955	Soybean	cytosol	28.47	56.54
Solyc04g008290.2.1	Tomato	nucleus	59.96	56.17
CDY03090	Canola	nucleus	61.39	55.56
KRH01846	Soybean	extracellular	34.16	55.49
CDY15798	Canola	endoplasmic reticulum, golgi	41.46	55.21
GSMUA_Achr7P06200_001	Banana	cytosol	48.04	45.92
GSMUA_Achr4P19380_001	Banana	cytosol	47.33	45.39
GSMUA_Achr4P03890_001	Banana	cytosol	46.8	44.88
GSMUA_Achr3P13450_001	Banana	cytosol	46.8	44.65
GSMUA_Achr9P17360_001	Banana	cytosol	45.2	43.72
GSMUA_Achr11P...	Banana	nucleus	38.43	37.57
GSMUA_Achr5P10040_001	Banana	nucleus	41.99	37.22
GSMUA_Achr5P11340_001	Banana	cytosol	43.95	37.03
GSMUA_Achr2P21660_001	Banana	endoplasmic reticulum, extracellular	60.85	36.08
GSMUA_Achr1P02510_001	Banana	cytosol	43.24	36.0
Bra026625.1-P	Field mustard	mitochondrion	22.78	33.33
CDY09401	Canola	endoplasmic reticulum, golgi, plasma membrane	25.8	25.48

Protein Annotations

EnsemblPlants:GSMUA_Achr6P23030_001	EnsemblPlants:GSMUA_Achr6T23030_001	EnsemblPlantsGene:GSMUA_Achr6G23030_001	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0000910
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF5
PFAM:PF03999	SEG:seg	UniParc:UPI00029504A2	UniProt:M0T9F1	MapMan:35.1	:

Description

65-kDa microtubule-associated protein 7 [Source:GMGC_GENE;Acc:GSMUA_Achr6G23030_001]

Coordinates

chr6:+:22553576..22565619

Molecular Weight (calculated)

64322.4 Da

IEP (calculated)

8.713

GRAVY (calculated)

-0.642

Length

562 amino acids

Sequence
(BLAST)

001: MLLEIEKECL EIYTRKVDEA SKAKAQLHQS VTAKEAEIAA LVASLGEHTV HSTKDKKAAS LKEQLASVTP ILENLRIKKE ERIKNFADVR LQIEKITAEI
101: REREHQHDAM TSLAIVDEHD LSMRKLNEQH EQLRELQKEK SDRLHKVLEY VNEVHSLCGV LGLDFRKIVV EVHPSLHETS PEQSTNISNK TLEGLALAIL
201: KLKAEKKIQL QKLRETMKSL FALWKLMGSP EQERKHFERL ACILESPEHE ITHSGLLSHK TIEQAEVEVN KLTKLKASKM KELVLKRRLE LEEECRRAHI
301: EPDTSMATEK TAALIDSGLV DPSELLANIE AQIVKVKEES ISRKEIMDRI SKWLATCEEE NWLEQYNQDE NRYSCGRGGH INLKRAEKAR ITIIKIPALV
401: DNLISKTFTW EDEKNKPFLY DGVRLVSMLE EYKLTRQQKE QEKRRDRDQK KLQTLLLTEK EAVFGSKPFP KRSNSLNRKP SGYSFNGKGN GFMTPVPRRL
501: SAGSATPELL IPRSYSGRHS GYFKEMRRLS TTPLNFIAPP KDDSLSTFTS ISGSEPESPT LT

Best Arabidopsis Sequence Match ( AT2G01910.2 )
(BLAST)

001: MLMELERECL QIYQRKVDEA ANSKAKLHQS VASIEAEVAS LMAALGVLNI NSPIKLDKGS KSLKEKLAAV TPLVEELRIQ KEERMKQFSD IKAQIEKISG
101: EISGYSDHLN KAMNISLTLE EQDLTLRNLN EYQTHLRTLQ KEKSDRLNKV LGYVNEVHAL CGVLGVDFSQ TVSAVHPSLH RTDQEQSTNI SDSTLEGLEH
201: MIQKLKTERK SRFQKLKDVV ASLFELWNLM DTPQEDRTKF GKVTYVVRSS EANITEPGIL STETIEQVST EVDSLSKLKA SRMKELVMKR RSELEDLCRL
301: THIQPDTSTS AEKSTALIDS GLVDPSELLA NIEMQINKIK DEAQSRKDIM DRIDRWLSAC EEENWLEEYN LDENRYSAGR GGHVNLKRAE RARVTINKIP
401: GMVDTLIKKT LVWEEDMQKS FLYDGVRLVN ILEDYKLTRK QQEEEKKRYR DQKKRQDLLL TQRESIYGSK PSPRRSSSFR KPNGFNISNG NGSVPPTPRR
501: GSVGTTTPDV LLTPRSYSGH HRQNGYFKEV RRLSTTPLNY VAMQKEDTVS TTYTSIYSSE PDSPLQG

Arabidopsis Description

MAP65-665-kDa microtubule-associated protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIS3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.