Factsheet for GSMUA_Achr1P02510_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P02510_001
GSMUA_Achr4P03390_001	nucleus
GSMUA_Achr4P11860_001
GSMUA_Achr5P10040_001
GSMUA_Achr5P11340_001
GSMUA_Achr5P14270_001	nucleus
GSMUA_Achr6P21190_001	nucleus
GSMUA_Achr9P23800_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51600.1	GSMUA_Achr4P11860_001	AT2G22640.1	25262777
AT5G51600.1	GSMUA_Achr9P23800_001	AT2G22640.1	25262777
AT5G51600.1	GSMUA_Achr4P03390_001	AT3G19590.1	25262777
AT5G51600.1	GSMUA_Achr4P03390_001	AT3G19590.1	25262777
AT5G51600.1	GSMUA_Achr6P21190_001	AT3G25980.1	25262777
AT5G51600.1	GSMUA_Achr6P21190_001	AT3G25980.1	25262777
AT5G51600.1	GSMUA_Achr5P14270_001	AT5G05510.1	25262777
AT5G51600.1	GSMUA_Achr5P14270_001	AT5G05510.1	25262777
AT5G51600.1	GSMUA_Achr1P02510_001	AT5G51600.1	25262777
AT5G51600.1	GSMUA_Achr5P10040_001	AT5G51600.1	25262777
AT5G51600.1	GSMUA_Achr5P11340_001	AT5G51600.1	25262777

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P11340_001	Banana	cytosol	79.7	80.66
TraesCS3A01G264600.1	Wheat	cytosol	66.67	65.31
GSMUA_Achr5P10040_001	Banana	nucleus	61.33	65.3
TraesCS3D01G264700.2	Wheat	cytosol	66.52	65.07
TraesCS3B01G297900.1	Wheat	cytosol	66.37	64.93
Zm00001d011615_P001	Maize	cytosol, nucleus, plastid	66.07	63.26
OQU87349	Sorghum	golgi, vacuole	66.96	63.22
TraesCS1A01G378900.1	Wheat	cytosol	63.11	62.92
TraesCS1D01G386100.1	Wheat	cytosol	62.67	62.11
Zm00001d030420_P001	Maize	cytosol	21.04	62.01
TraesCS1B01G400200.1	Wheat	cytosol	62.52	61.97
VIT_16s0022g01820.t01	Wine grape	nucleus	66.37	61.37
HORVU1Hr1G083810.7	Barley	cytosol	61.63	60.82
Zm00001d043831_P001	Maize	cytosol, mitochondrion	66.07	60.76
HORVU3Hr1G063620.1	Barley	plastid	65.93	59.65
KRG92454	Soybean	nucleus	63.56	59.01
KRH34346	Soybean	cytosol	64.15	58.12
Solyc03g007130.2.1	Tomato	nucleus	63.41	57.76
Os05t0552900-01	Rice	cytosol	62.52	57.73
VIT_15s0048g00860.t01	Wine grape	cytosol, nucleus, plasma membrane	51.11	57.6
PGSC0003DMT400079660	Potato	cytosol	63.41	57.45
KRH38719	Soybean	cytosol	54.67	57.3
AT5G51600.1	Thale cress	cytosol	58.37	55.73
PGSC0003DMT400070431	Potato	nucleus	56.89	55.33
Bra023930.1-P	Field mustard	cytosol	57.93	55.15
Bra028266.1-P	Field mustard	cytosol	57.48	54.88
Bra010069.1-P	Field mustard	nucleus	43.11	53.99
CDY00270	Canola	nucleus	43.11	53.99
CDX87240	Canola	nucleus	43.26	53.97
CDX86911	Canola	nucleus	42.96	53.8
Solyc11g072280.1.1	Tomato	extracellular	61.04	53.44
Bra035900.1-P	Field mustard	nucleus	42.67	53.23
CDY16786	Canola	nucleus	42.67	53.04
AT5G62250.1	Thale cress	nucleus	43.11	53.01
GSMUA_Achr4P19380_001	Banana	cytosol	41.78	48.12
GSMUA_Achr3P13450_001	Banana	cytosol	41.63	47.71
GSMUA_Achr7P06200_001	Banana	cytosol	41.48	47.62
Zm00001d006888_P001	Maize	cytosol	18.81	47.57
GSMUA_Achr4P03890_001	Banana	cytosol	40.74	46.93
Solyc01g091380.2.1	Tomato	plastid	51.11	46.37
PGSC0003DMT400033224	Potato	nucleus	51.56	46.09
CDY62713	Canola	cytosol	46.07	45.47
Bra014467.1-P	Field mustard	cytosol	43.41	45.22
CDX89081	Canola	cytosol	45.93	45.19
KRH40591	Soybean	nucleus	46.67	44.94
AT3G60840.1	Thale cress	cytosol	45.04	44.9
KRH09228	Soybean	cytosol	34.96	44.11
GSMUA_Achr6P23030_001	Banana	cytosol	36.0	43.24
GSMUA_Achr9P17360_001	Banana	cytosol	36.89	42.86
GSMUA_Achr11P...	Banana	nucleus	35.26	41.39
GSMUA_Achr10P...	Banana	nucleus	35.85	40.07
GSMUA_Achr6P04350_001	Banana	cytosol	36.89	39.52
GSMUA_Achr6P05980_001	Banana	cytosol	33.78	38.32
Zm00001d046884_P001	Maize	plastid	23.85	33.54
GSMUA_Achr2P21660_001	Banana	endoplasmic reticulum, extracellular	37.04	26.37

Protein Annotations

EnsemblPlants:GSMUA_Achr1P02510_001	EnsemblPlants:GSMUA_Achr1T02510_001	EnsemblPlantsGene:GSMUA_Achr1G02510_001	Gene3D:1.20.58.1520	GO:GO:0000226	GO:GO:0000910
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0007049	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:MAP65_Ase1_PRC1	ncoils:Coil	PANTHER:PTHR19321	PANTHER:PTHR19321:SF8
PFAM:PF03999	SEG:seg	UniParc:UPI000296F57C	UniProt:M0RWF9	MapMan:13.4.3.5	:

Description

65-kDa microtubule-associated protein 3 [Source:GMGC_GENE;Acc:GSMUA_Achr1G02510_001]

Coordinates

chr1:+:2082960..2086239

Molecular Weight (calculated)

76779.5 Da

IEP (calculated)

5.481

GRAVY (calculated)

-0.479

Length

675 amino acids

Sequence
(BLAST)

001: MACPSNDQLL QLETTCGSLL YELQIIWDEV GESDAERDKM LLELEQECLE VYRRKVDQAN RCRAQLRQAI ADSEAELAAI CSAMGEPPVH TRQSNQRAGS
101: LKEELESITP QLEEMRMKKV ERLNHFIEVI EQIRKISLEI MPSGCNPLML AVDESDLSTR RLEDLYRQLE LLQKEKSDRL KQVMDHLSSL NALCSVLGVD
201: FKETIREIHP NLDETEVSKC VSNTTIERLA MAIGRLRDIK IERMKKLQDL ASTMLELWNL MDTPIEEQQL FQNVTCNIAA SEQEITEANT LSVDLLNYVE
301: AEVLRLEQLK VSKMKELVLK KKTELKELRW RVHLVAEAEN QEEFEISAIE SGAIDATLIL EQIEFQIATV KEEAFSRKDI LERVEKWFAA CQEEAWLEEY
401: NRDENRYNAG RGAHLSLKRA EKARALVNKI PAIVETLAAK ITQWEKERGI EFTYDGVRLL SMLEEYTIVR QEKEQERKRQ RDQKRLQGQI IAEQEALYGS
501: KPSPSKSQSA KKIPRTSAGC PSRRLSGATQ PPKLDHLHSA KPVRSAKKTD DLGILSPGAR GADIAGLPVK KLTYNAMTTH QEVGVPRKPF APILPVNNMP
601: TTPSKHIVNT FEENKSPNVM LTPKTPMAVQ APMQVADTPV PPTCLIDKAV AKVVAPVEQT EYSFEERRLV FYLSR

Best Arabidopsis Sequence Match ( AT5G51600.1 )
(BLAST)

001: MASVQKDPIL QVETTCGSLL FELQIIWDEV GETETDRDQM LLELERECLE VYRRKVDQAN RCRAQLRQAI ADAEAQLAAI CSAMGERPVH IRQSDQSVGS
101: LKQELGRILP ELEEMQKRKV ERRNQFIVVM EQIDSITNDI KGQGELVHSE PLIDETNLSM RKLEELHCQL QVLQKEKIDR VETIRKHLCT LYSHCSVLGM
201: DFNEVVGQVN PTLSDPEGPR SLSDHTIEKL GAAVQKLMEV KIQRMQRLQD LATTMLELWN LMDTPIEEQQ EYQHITCNIA ASEHEITEAN SLSEDFIKYV
301: EAEVVRLDEV KASKMKELVL KKRSELEEIC RKTHLLPVSD SAIDQTIVAI ESGIVDATMV LEHLEQHISK IKEEALSRKE ILERVEKWLS ACDEESWLEE
401: YNRDDNRYNA GRGAHLTLKR AEKARNLVTK LPGMVEALAS KTIVWEQENG IEFLYDGIRL LSMLEEYNIL RQEREEEHRR QRDQKKLQGQ LIAEQEALYG
501: SKPSPSKPLG GKKAPRMSTG GASNRRLSLG AAMHQTPKPN KKADHRHNDG ALSNGRRGLD IAGLPSRKQS MNPSEMLQSP LVRKPFSPIS TTVVASKANI
601: ATTTTQQLPK NNAVNEISSF ATPIKNNNIL RNLEEEKMMT MMMQTPKNVA AMIPIPSTPA TVSVPMHTAP TPFTNNARLM SEKPEVVEYS FEERRLAFML
701: QSECRLV

Arabidopsis Description

MAP65-365-kDa microtubule-associated protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHM4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.