Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr4P11860_001 | |
| GSMUA_Achr5P14270_001 | |
| GSMUA_Achr6P21190_001 | cytoskeleton, nucleus |
| GSMUA_Achr9P23800_001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009117.1-P | Field mustard | nucleus | 42.94 | 50.99 |
| CDX70146 | Canola | nucleus | 42.94 | 50.99 |
| CDX98847 | Canola | nucleus | 41.26 | 49.66 |
| AT5G05510.1 | Thale cress | nucleus | 40.15 | 45.86 |
| KRG97697 | Soybean | nucleus | 44.24 | 45.59 |
| KRH31175 | Soybean | nucleus | 43.87 | 44.87 |
| VIT_13s0067g01530.t01 | Wine grape | nucleus | 45.54 | 40.5 |
| Os11t0128700-00 | Rice | nucleus | 45.35 | 39.29 |
| Solyc06g051040.2.1 | Tomato | cytosol, nucleus, plastid | 42.38 | 38.78 |
| Os12t0125300-01 | Rice | nucleus | 44.8 | 38.75 |
| EES09179 | Sorghum | nucleus | 44.05 | 38.35 |
| HORVU7Hr1G029580.3 | Barley | nucleus | 43.31 | 37.52 |
| TraesCSU01G188700.1 | Wheat | nucleus | 42.75 | 37.1 |
| TraesCS5A01G142400.1 | Wheat | nucleus | 42.75 | 37.1 |
| HORVU5Hr1G045460.1 | Barley | mitochondrion | 43.31 | 36.01 |
| TraesCS5D01G149700.1 | Wheat | plastid | 43.31 | 35.36 |
| Zm00001d023279_P001 | Maize | nucleus | 41.64 | 35.0 |
| TraesCS5B01G141100.1 | Wheat | nucleus, plastid | 42.75 | 34.85 |
| EES16550 | Sorghum | mitochondrion, nucleus | 42.01 | 31.56 |
| GSMUA_Achr1P16590_001 | Banana | nucleus | 12.08 | 15.22 |
| GSMUA_Achr3P11640_001 | Banana | endoplasmic reticulum | 12.27 | 14.44 |
| GSMUA_Achr10P... | Banana | nucleus | 5.2 | 7.12 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P14270_001 | EnsemblPlants:GSMUA_Achr5T14270_001 | EnsemblPlantsGene:GSMUA_Achr5G14270_001 | Gene3D:1.25.40.430 | GO:GO:0007049 | GO:GO:0007094 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:Bub1/Mad3 | InterPro:IPR013212 | InterPro:Mad3/Bub1_I |
| PANTHER:PTHR14030 | PANTHER:PTHR14030:SF2 | PFAM:PF08311 | PFscan:PS51489 | SEG:seg | SMART:SM00777 |
| UniParc:UPI000295B697 | UniProt:M0SYF6 | MapMan:13.3.5.5.5 | : | : | : |
Description
Putative Mad3/BUB1 homology region 1 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G14270_001]
Coordinates
chr5:+:10250249..10254059
Molecular Weight (calculated)
60952.5 Da
IEP (calculated)
5.665
GRAVY (calculated)
-0.613
Length
538 amino acids
Sequence
(BLAST)
(BLAST)
001: MADDFQKQLL SSLVSDIKNY DGRDPLRPWL HGIRRMKESL PPRILKEKLP RFLQKCAQTF ESDRRYRNDA RYLRVWIELM DYVDDAKVLL RKMEKNGIGL
101: KRAMFYLAYA LYYEKQKKFT EAEKMYHMGV QNLAEPAGEL QKSYEQFLRR MELYKKRKAK KKEIVDDKVQ IVDAEDASQK PHHIEGISNS GNMIDNIILS
201: GHPKFIQDSC TGSSKPRCKV RGSAVLGRSS KHRDYPVVDW EKQIPHDTDD TVVVKFVDSA IVGRSEAEDA CHHGLVDPTI NMKEAMNAIG SMFREPIEPE
301: IMVKRRSSKP KAIPHTNGFE VFIDDDFGDG PNFGSCPTRN EQCGVSDLPN LREFKILADD DEVDEVTDRQ IEVAKPPIAN ASICSKQHDP ASSSYGNSKM
401: IIPGLHEETI VHRFVGSTVL GEPKVENACH HGLVDPTINL KEAMDDINSM FGKPLDFFNG DKPKKKPGFV CSDKQPACDG FAVSCEGFSI LADDDMEDPE
501: NNAPPENFCE NGDLFEPTIF TKEAMAEINE MFGKPLDF
101: KRAMFYLAYA LYYEKQKKFT EAEKMYHMGV QNLAEPAGEL QKSYEQFLRR MELYKKRKAK KKEIVDDKVQ IVDAEDASQK PHHIEGISNS GNMIDNIILS
201: GHPKFIQDSC TGSSKPRCKV RGSAVLGRSS KHRDYPVVDW EKQIPHDTDD TVVVKFVDSA IVGRSEAEDA CHHGLVDPTI NMKEAMNAIG SMFREPIEPE
301: IMVKRRSSKP KAIPHTNGFE VFIDDDFGDG PNFGSCPTRN EQCGVSDLPN LREFKILADD DEVDEVTDRQ IEVAKPPIAN ASICSKQHDP ASSSYGNSKM
401: IIPGLHEETI VHRFVGSTVL GEPKVENACH HGLVDPTINL KEAMDDINSM FGKPLDFFNG DKPKKKPGFV CSDKQPACDG FAVSCEGFSI LADDDMEDPE
501: NNAPPENFCE NGDLFEPTIF TKEAMAEINE MFGKPLDF
001: MAKNENGYEN LLASLIVDIK SYSGKDHLLP WIRGVKKMKE SLPSQILNEK LPRFLQKCAE SFESDKRYKN DSRYIRVWLQ LMDFVDDPRA LLRTMEAKSI
101: GTKRSLFYQA YALHYEKMKR FEDAEKMYRL GVQNLAEPMD ELQKSYLQFV TRMERHKKKK TQRQEQKLSG KHHKVDERQQ HEPVLNFVDK AIVGKPEAEN
201: ACHHGLVDPT INMKEAMNTI NNMFKEPIET APLQRRSRQR SQNKENQGCN NSFEVFLDEN LECETGTSGK AKTSTTQCGS QPNQESFEIF IDDENTDETA
301: DENDEAGKAF VFLLPRDHSP ESSEEADRNT PPRARFREDT VVRRFVGSTI SDEPEAVENA CHHGLVDPTV NLKEAMEDIN NMFGEPINFV RPNRSKNKGK
401: AVVETKPNPA AGFSILEDDD EEEAEQEHQG KSQPTQRLPS KSDERELFEP TVCTKVALDE INKLFAMPMD F
101: GTKRSLFYQA YALHYEKMKR FEDAEKMYRL GVQNLAEPMD ELQKSYLQFV TRMERHKKKK TQRQEQKLSG KHHKVDERQQ HEPVLNFVDK AIVGKPEAEN
201: ACHHGLVDPT INMKEAMNTI NNMFKEPIET APLQRRSRQR SQNKENQGCN NSFEVFLDEN LECETGTSGK AKTSTTQCGS QPNQESFEIF IDDENTDETA
301: DENDEAGKAF VFLLPRDHSP ESSEEADRNT PPRARFREDT VVRRFVGSTI SDEPEAVENA CHHGLVDPTV NLKEAMEDIN NMFGEPINFV RPNRSKNKGK
401: AVVETKPNPA AGFSILEDDD EEEAEQEHQG KSQPTQRLPS KSDERELFEP TVCTKVALDE INKLFAMPMD F
Arabidopsis Description
At5g05510 [Source:UniProtKB/TrEMBL;Acc:Q9FFG4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.