Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G05510.1 | EES07816 | AT2G22640.1 | 25262777 |
| AT5G05510.1 | EES12410 | AT3G25980.1 | 25262777 |
| AT5G05510.1 | EES12410 | AT3G25980.1 | 25262777 |
| AT5G05510.1 | EES09179 | AT5G05510.1 | 25262777 |
| AT5G05510.1 | EES16550 | AT5G05510.1 | 25262777 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023279_P001 | Maize | nucleus | 73.04 | 81.72 |
| EES09179 | Sorghum | nucleus | 65.36 | 75.73 |
| Os12t0125300-01 | Rice | nucleus | 57.96 | 66.72 |
| Os11t0128700-00 | Rice | nucleus | 57.82 | 66.67 |
| TraesCS5A01G142400.1 | Wheat | nucleus | 56.7 | 65.48 |
| HORVU7Hr1G029580.3 | Barley | nucleus | 56.7 | 65.38 |
| TraesCSU01G188700.1 | Wheat | nucleus | 55.87 | 64.52 |
| HORVU5Hr1G045460.1 | Barley | mitochondrion | 57.26 | 63.37 |
| TraesCS5B01G141100.1 | Wheat | nucleus, plastid | 56.56 | 61.36 |
| TraesCS5D01G149700.1 | Wheat | plastid | 56.42 | 61.3 |
| Bra009117.1-P | Field mustard | nucleus | 29.75 | 47.02 |
| CDX70146 | Canola | nucleus | 28.35 | 44.81 |
| AT5G05510.1 | Thale cress | nucleus | 28.77 | 43.74 |
| CDX98847 | Canola | nucleus | 27.23 | 43.62 |
| GSMUA_Achr5P14270_001 | Banana | cytosol | 31.56 | 42.01 |
| KRH31175 | Soybean | nucleus | 29.19 | 39.73 |
| KRG97697 | Soybean | nucleus | 28.49 | 39.08 |
| Solyc06g051040.2.1 | Tomato | cytosol, nucleus, plastid | 30.87 | 37.59 |
| VIT_13s0067g01530.t01 | Wine grape | nucleus | 31.15 | 36.86 |
| EES04683 | Sorghum | cytosol | 8.1 | 14.32 |
| KXG36289 | Sorghum | plastid | 9.08 | 10.52 |
Protein Annotations
| EnsemblPlants:EES16550 | EnsemblPlantsGene:SORBI_3008G019600 | Gene3D:1.25.40.430 | GO:GO:0007049 | GO:GO:0007094 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016043 | InterPro:Bub1/Mad3 | InterPro:IPR013212 | InterPro:Mad3/Bub1_I | PANTHER:PTHR14030 |
| PANTHER:PTHR14030:SF14 | PFAM:PF08311 | PFscan:PS51489 | ProteinID:EES16550 | ProteinID:EES16550.2 | SEG:seg |
| SMART:SM00777 | UniParc:UPI00081AEA9B | UniProt:C5YQQ1 | MapMan:13.3.5.5.5 | : | : |
Description
hypothetical protein
Coordinates
chr8:+:1672875..1678639
Molecular Weight (calculated)
80011.5 Da
IEP (calculated)
7.268
GRAVY (calculated)
-0.910
Length
716 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVGGPHLSR ARYRYPSPRA AERDEMKFEI GRKPSRPTTT TNPPRCSCSS CRQAANQPDR SNPPMAAAAT EDAKEKELLS SVVGDIRSYS GSDPLRPWLR
101: GLRKMERALL PATLREKLPR FLQKCAQEFQ DDARYRDDPR YLRVWIQLMD YVTDAKPLLK KMERNGIGLK RASFYMAYAL YYEKHKRFND AEKMYCLGIQ
201: NLAEPIGELH RAHEQFGFRM ESYKRKNKER MPRKPGSSAA SMNQVKGESR NSKEQKSNTK QTSGSSSNPS LGSYPPLGPA KVGMLSRGNS GANKNLSRCN
301: SDDTVVVRFI GSALVGKSET EDACHHGLVE PTTNTKEALD AINGMFMEPL EPETILKRRS KRENPNYNQQ GSAFDIFVDG DEPSGNDTNM LQNNSVKQDH
401: TKLSQQTIGF EIYVDEDGPN GNDQNGTQNR NSRKENMKLN QEPSVFEIFV DEDGPNDNNQ NAGRNRNCGK ENMKVNQDSS GFEIFVDENE ANGTVRNAMC
501: YKSNRYPPRP LSESSKHQGE SDFQKPFVGG FAILPNDEEQ CEESYGGANI ISRTVQPTHD TSTLLCPVQG NSGTRNREGP HPLTSGIRED TVIRRFVGST
601: IDDEPKVENA CHHGLVDPTV NLKEAMDDIN NMFGKPLNFK GERIKSKTNA QSDGKVASVS GFSILADDDL KENSTSKSSQ SNSCKFGYEN GLFEPTITTR
701: DVMAEINDMF GMPLDL
101: GLRKMERALL PATLREKLPR FLQKCAQEFQ DDARYRDDPR YLRVWIQLMD YVTDAKPLLK KMERNGIGLK RASFYMAYAL YYEKHKRFND AEKMYCLGIQ
201: NLAEPIGELH RAHEQFGFRM ESYKRKNKER MPRKPGSSAA SMNQVKGESR NSKEQKSNTK QTSGSSSNPS LGSYPPLGPA KVGMLSRGNS GANKNLSRCN
301: SDDTVVVRFI GSALVGKSET EDACHHGLVE PTTNTKEALD AINGMFMEPL EPETILKRRS KRENPNYNQQ GSAFDIFVDG DEPSGNDTNM LQNNSVKQDH
401: TKLSQQTIGF EIYVDEDGPN GNDQNGTQNR NSRKENMKLN QEPSVFEIFV DEDGPNDNNQ NAGRNRNCGK ENMKVNQDSS GFEIFVDENE ANGTVRNAMC
501: YKSNRYPPRP LSESSKHQGE SDFQKPFVGG FAILPNDEEQ CEESYGGANI ISRTVQPTHD TSTLLCPVQG NSGTRNREGP HPLTSGIRED TVIRRFVGST
601: IDDEPKVENA CHHGLVDPTV NLKEAMDDIN NMFGKPLNFK GERIKSKTNA QSDGKVASVS GFSILADDDL KENSTSKSSQ SNSCKFGYEN GLFEPTITTR
701: DVMAEINDMF GMPLDL
001: MAKNENGYEN LLASLIVDIK SYSGKDHLLP WIRGVKKMKE SLPSQILNEK LPRFLQKCAE SFESDKRYKN DSRYIRVWLQ LMDFVDDPRA LLRTMEAKSI
101: GTKRSLFYQA YALHYEKMKR FEDAEKMYRL GVQNLAEPMD ELQKSYLQFV TRMERHKKKK TQRQEQKLSG KHHKVDERQQ HEPVLNFVDK AIVGKPEAEN
201: ACHHGLVDPT INMKEAMNTI NNMFKEPIET APLQRRSRQR SQNKENQGCN NSFEVFLDEN LECETGTSGK AKTSTTQCGS QPNQESFEIF IDDENTDETA
301: DENDEAGKAF VFLLPRDHSP ESSEEADRNT PPRARFREDT VVRRFVGSTI SDEPEAVENA CHHGLVDPTV NLKEAMEDIN NMFGEPINFV RPNRSKNKGK
401: AVVETKPNPA AGFSILEDDD EEEAEQEHQG KSQPTQRLPS KSDERELFEP TVCTKVALDE INKLFAMPMD F
101: GTKRSLFYQA YALHYEKMKR FEDAEKMYRL GVQNLAEPMD ELQKSYLQFV TRMERHKKKK TQRQEQKLSG KHHKVDERQQ HEPVLNFVDK AIVGKPEAEN
201: ACHHGLVDPT INMKEAMNTI NNMFKEPIET APLQRRSRQR SQNKENQGCN NSFEVFLDEN LECETGTSGK AKTSTTQCGS QPNQESFEIF IDDENTDETA
301: DENDEAGKAF VFLLPRDHSP ESSEEADRNT PPRARFREDT VVRRFVGSTI SDEPEAVENA CHHGLVDPTV NLKEAMEDIN NMFGEPINFV RPNRSKNKGK
401: AVVETKPNPA AGFSILEDDD EEEAEQEHQG KSQPTQRLPS KSDERELFEP TVCTKVALDE INKLFAMPMD F
Arabidopsis Description
At5g05510 [Source:UniProtKB/TrEMBL;Acc:Q9FFG4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.