CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021588_P002	Maize	cytosol, plastid	75.08	83.6
Os07t0508500-01	Rice	cytosol	64.4	71.07
TraesCS2B01G249400.1	Wheat	plastid	61.0	68.3
TraesCS2A01G226000.1	Wheat	plastid	60.84	68.12
HORVU0Hr1G039990.19	Barley	cytosol, nucleus	31.07	64.0
GSMUA_Achr10P...	Banana	nucleus	36.25	57.0
AT2G20635.1	Thale cress	cytosol	42.23	49.71
VIT_12s0028g03360.t01	Wine grape	nucleus	43.53	48.73
KRH25625	Soybean	cytosol	41.1	47.83
CDX81974	Canola	cytosol	38.51	47.79
CDY13862	Canola	cytosol	38.51	47.7
Solyc07g053820.2.1	Tomato	cytosol, nucleus, plastid	40.78	47.64
PGSC0003DMT400082809	Potato	cytosol, nucleus, plastid	40.45	47.44
Bra031135.1-P	Field mustard	cytosol	36.25	47.16
KRH55929	Soybean	nucleus	39.97	46.69
EES04683	Sorghum	cytosol	8.74	13.33
EES09179	Sorghum	nucleus	10.03	10.03
EES16550	Sorghum	mitochondrion, nucleus	10.52	9.08

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.430	MapMan:13.3.5.5.1	MapMan:18.4.9	UniProt:A0A1B6QEE8	InterPro:Bub1/Mad3
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0007094	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016043	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR013212	EnsemblPlants:KXG36289	ProteinID:KXG36289	ProteinID:KXG36289.1	InterPro:Kinase-like_dom_sf	InterPro:Mad3/Bub1_I
PFAM:PF00069	PFAM:PF08311	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51489	PANTHER:PTHR14030
PANTHER:PTHR14030:SF6	InterPro:Prot_kinase_dom	SMART:SM00220	SMART:SM00777	EnsemblPlantsGene:SORBI_3002G313700	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI00081AD3BB	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:68700792..68708636

Molecular Weight (calculated)

69917.4 Da

IEP (calculated)

8.068

GRAVY (calculated)

-0.308

Length

618 amino acids

Sequence
(BLAST)

001: MVVLERTPGA APGAASSPLR KSPRFSREVA SPSPPSDPIL PYLRSISRAM DELGTGPQYD MATLDRLKHY LIECIAKYGD DYQYSTDPRL LKIWILYADA
101: IEDFPSVYNQ LEEKRMFLEH ALLYESYALY LIAHGKVTEA DKVYGIGISR KAEPLDNLKK MHLRFLKHLE NIVEEADAEE KASLFFDSCC SPSATPIAPL
201: GVSSRPLRVY SRKRRRPCMP TPTTAALDPI IMTLSPTTRD KLLDKPKPSK KQKNEPSVVD PWSASTRNTL LEKINGDLRT FSGYHKSNKV YYGKVPLTSP
301: LNVLRNKVIE LGGRKYQIKG STGTGAFAKV YKATVDGTEE MVALKIQNPL FVLEFYMYRQ LDLRISDVER PSFGYAHDMH IFSDVSVLVC DYLPYGTLLD
401: VINSHLVVGR CMDEVLCMYY TIEMLNMLET LHSVGLIHGD VKPDNILVCY PSGEITEDTF RSEKRYEKNQ GLCLVDWGRG IDLNLFPSPT EFNGDCGTSG
501: FRCIEMQEHR NWTYQVDTYG LCVVVHMMLH GTGMSVEKVP RIGGGSEYRP KLPFKRYWNV DLWQKLFSTL LNPPSNDSDV AALQSLRASF REYMCSNRQL
601: VGKLNQMLAK QKASLCSS

Best Arabidopsis Sequence Match ( AT2G20635.1 )
(BLAST)

001: MTIGYRDAAG DPLFPWLMEI KNSMEDLYAG KNSGYDLDKL LFDCISTYKK DSRYRNDLRF LKIWFLYLEG REDFERVYRE IEETEICKGH SLLYEWYAIF
101: LEVKGLWRRA NSVYQTGLSR KAEPFDRLKE AHSLFLQRIS KRTKASSLEK VGDDAQATDL ETGFVNPWET STVNGLIHKI KPQLVKYDGY HVSNKVFPGK
201: ANLSSLQNYS RNKIIEIGGR KYQMKGCAGQ GGFAQVFKAF IDSNPDEVVA LKVQKPPFPW EFHMYRQLDC RIPDSQRSSF GLAQRVHVYS DYSILVCDYL
301: SHGTLQDVIN SYVVVGKSME EVLCMYYTIE MLNMLETLHS VGIIHGDFKP DNLLIRYPPE NLTETGFHEK TGSWSKKGLC LVDWGRGIDL SLFPRTTEFT
401: GDCRTSGFRC VEMKEDKPWK FQVDTYGLCV IVHMMLHNVY MEIEKKQSLD GGYINMPRTS FKRYWKVDLW KELFTKLLNR ETCEDDTETL RNLRKSMEEY
501: ICSDPKLMKK LNELLAKQRI SLCSS

Arabidopsis Description

BUB1Mitotic checkpoint serine/threonine-protein kinase BUB1 [Source:UniProtKB/Swiss-Prot;Acc:F4IVI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.