Factsheet for PGSC0003DMT400082809

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g053820.2.1	Tomato	cytosol, nucleus, plastid	92.6	92.25
VIT_12s0028g03360.t01	Wine grape	nucleus	67.17	64.13
KRH25625	Soybean	cytosol	59.39	58.95
KRH55929	Soybean	nucleus	57.69	57.47
AT2G20635.1	Thale cress	cytosol	57.12	57.33
GSMUA_Achr10P...	Banana	nucleus	42.69	57.25
CDY13862	Canola	cytosol	54.08	57.11
Bra031135.1-P	Field mustard	cytosol	51.42	57.05
CDX81974	Canola	cytosol	53.89	57.03
TraesCS2B01G249400.1	Wheat	plastid	49.72	47.46
TraesCS2A01G226000.1	Wheat	plastid	49.53	47.28
Os07t0508500-01	Rice	cytosol	49.34	46.43
Zm00001d021588_P002	Maize	cytosol, plastid	48.2	45.77
HORVU0Hr1G039990.19	Barley	cytosol, nucleus	23.34	41.0
KXG36289	Sorghum	plastid	47.44	40.45
PGSC0003DMT400025922	Potato	cytosol	12.9	17.57

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.430	MapMan:13.3.5.5.1	MapMan:18.4.9	InterPro:Bub1/Mad3	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0007049	GO:GO:0007094	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR013212
InterPro:Kinase-like_dom_sf	UniProt:M1D6A6	InterPro:Mad3/Bub1_I	PFAM:PF00069	PFAM:PF08311	EnsemblPlantsGene:PGSC0003DMG400032825
PGSC:PGSC0003DMG400032825	EnsemblPlants:PGSC0003DMT400082809	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51489	PANTHER:PTHR14030
PANTHER:PTHR14030:SF6	InterPro:Prot_kinase_dom	SMART:SM00220	SMART:SM00777	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000295EA34	:	:	:	:	:

Description

ATP binding / protein kinase/ protein serine/threonine kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400032825]

Coordinates

chr7:-:49381736..49388919

Molecular Weight (calculated)

60842.3 Da

IEP (calculated)

8.591

GRAVY (calculated)

-0.378

Length

527 amino acids

Sequence
(BLAST)

001: MAVISKNQSN TTSSDDPLLP WLWSIEKSLK ERTSIDGRDL HELCSNCIST FKNNPRYQND VRFLKIWFLY MDSSSNHESI YREIEQNKIC LFNSLLYETY
101: ALFLEAKGRL IDAFLIYHLG ISRNAEPLGR LKKAQVLFLE RMSEKVTAGS LQKMDIVSEN GGACVNPWLI STIKNLLQKK NPEILKYEGY HPNKKAYSGK
201: VALSTLQKSA RNKTIDIGGY SYQIKGCAGQ GGFAQVFKAC CDGNPDEVVA LKIQKPAFPW EFYIYRQLDM RIPAKERLSF GYAHRLHLYS DYSILVSDFL
301: ANGTLQDAIN SNVVLGGAME EVLCIYYTIE MLCILEILHD ARIIHGDFKP DNLLIRYARD DLAEDLENFR QRTGPWSEQG LSLVDWGRGI DLSLFPDQTE
401: FIGDSRTSGF RSIQMQEKKP WKYQVDAYGL CVIVHMMLHN SYMEIERRPS PHGGHSYQPK LPFKRYWRVE LWKSLFTKLL NIDHTEDHKN MLKSLRESFQ
501: NYMCSNPQLI KKLRQFLAKQ KTSLCSS

Best Arabidopsis Sequence Match ( AT2G20635.1 )
(BLAST)

001: MTIGYRDAAG DPLFPWLMEI KNSMEDLYAG KNSGYDLDKL LFDCISTYKK DSRYRNDLRF LKIWFLYLEG REDFERVYRE IEETEICKGH SLLYEWYAIF
101: LEVKGLWRRA NSVYQTGLSR KAEPFDRLKE AHSLFLQRIS KRTKASSLEK VGDDAQATDL ETGFVNPWET STVNGLIHKI KPQLVKYDGY HVSNKVFPGK
201: ANLSSLQNYS RNKIIEIGGR KYQMKGCAGQ GGFAQVFKAF IDSNPDEVVA LKVQKPPFPW EFHMYRQLDC RIPDSQRSSF GLAQRVHVYS DYSILVCDYL
301: SHGTLQDVIN SYVVVGKSME EVLCMYYTIE MLNMLETLHS VGIIHGDFKP DNLLIRYPPE NLTETGFHEK TGSWSKKGLC LVDWGRGIDL SLFPRTTEFT
401: GDCRTSGFRC VEMKEDKPWK FQVDTYGLCV IVHMMLHNVY MEIEKKQSLD GGYINMPRTS FKRYWKVDLW KELFTKLLNR ETCEDDTETL RNLRKSMEEY
501: ICSDPKLMKK LNELLAKQRI SLCSS

Arabidopsis Description

BUB1Mitotic checkpoint serine/threonine-protein kinase BUB1 [Source:UniProtKB/Swiss-Prot;Acc:F4IVI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.