Factsheet for VIT_12s0028g03360.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g053820.2.1	Tomato	cytosol, nucleus, plastid	65.04	67.86
PGSC0003DMT400082809	Potato	cytosol, nucleus, plastid	64.13	67.17
GSMUA_Achr10P...	Banana	nucleus	45.29	63.61
AT2G20635.1	Thale cress	cytosol	60.14	63.24
KRH25625	Soybean	cytosol	59.78	62.15
KRH55929	Soybean	nucleus	59.06	61.63
CDY13862	Canola	cytosol	54.71	60.52
Bra031135.1-P	Field mustard	cytosol	50.91	59.16
CDX81974	Canola	cytosol	53.26	59.04
Zm00001d021588_P002	Maize	cytosol, plastid	50.18	49.91
Os07t0508500-01	Rice	cytosol	50.36	49.64
TraesCS2A01G226000.1	Wheat	plastid	48.91	48.91
TraesCS2B01G249400.1	Wheat	plastid	48.91	48.91
KXG36289	Sorghum	plastid	48.73	43.53
HORVU0Hr1G039990.19	Barley	cytosol, nucleus	23.55	43.33
VIT_18s0122g00470.t01	Wine grape	nucleus	11.59	16.8
VIT_13s0067g01530.t01	Wine grape	nucleus	12.86	11.74

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.430	EntrezGene:100260743	wikigene:100260743	MapMan:13.3.5.5.1	MapMan:18.4.9
InterPro:Bub1/Mad3	ProteinID:CBI21878	ProteinID:CBI21878.3	UniProt:E0CTG3	EMBL:FN595235	GO:GO:0000003
GO:GO:0000166	GO:GO:0000778	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0006468	GO:GO:0007049	GO:GO:0007094	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0051754	InterPro:IPR000719
InterPro:IPR013212	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100260743	wikigene:LOC100260743	InterPro:Mad3/Bub1_I	PFAM:PF00069
PFAM:PF08311	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51489	PANTHER:PTHR14030	PANTHER:PTHR14030:SF6
InterPro:Prot_kinase_dom	SMART:SM00220	SMART:SM00777	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001BE1DC6
ArrayExpress:VIT_12s0028g03360	EnsemblPlantsGene:VIT_12s0028g03360	EnsemblPlants:VIT_12s0028g03360.t01	RefSeq:XP_002274770	RefSeq:XP_002274770.2	SEG:seg

Description

No Description!

Coordinates

chr12:+:4129420..4133733

Molecular Weight (calculated)

63757.8 Da

IEP (calculated)

8.350

GRAVY (calculated)

-0.343

Length

552 amino acids

Sequence
(BLAST)

001: MVVALPESTN DASGNDPLLP WLWYSLSLSL CFLSHEFSHN VLIKSRSIKK ALDGFNSSHK NGKDLENLLS NCITTFKGNP QYRNDPRFLK IWFLYLDARE
101: DFASIFREME ENKICVGQSL LYESYALFLE AKGKLLDAFM VYQIGVSRKA EPLDKLKKAQ ALFMDRMKEI VNACSLEPID DGESAELGTS FTNPWSISTI
201: KDLLQKKKPQ ILKYDGYHPS TKAYSRKVAL SSLQNSSRNK IIEIGGYKYQ IKGCAGKGGF AQVFKAYVNY NPDEVVALKI QKPAFPWEFY MYRQLDKRIP
301: DKERSSFGFA HRLHLYSDCS ILVSEYLAHG TLQDAINSYV VIGGSMEEVL CIYYTIEMLY MLETIHSVGI IHGDFKPDNL LIRYSRHDLT EEEFHERCGP
401: WRDQGLCLVD WGRGIDLSLF PSNTEFKGDC RTSGFRCVEM QEHKPWKFQA YTYGLCVIVH MMLHNSYMAI EKKPSFDGGY IYQPKSPFKR YWNVQLWKNL
501: FTKLLNSSPH EDHSRLLQNL RESFQDYMCS NPQLIKKLKH LLVKQRASLC CA

Best Arabidopsis Sequence Match ( AT2G20635.1 )
(BLAST)

001: MTIGYRDAAG DPLFPWLMEI KNSMEDLYAG KNSGYDLDKL LFDCISTYKK DSRYRNDLRF LKIWFLYLEG REDFERVYRE IEETEICKGH SLLYEWYAIF
101: LEVKGLWRRA NSVYQTGLSR KAEPFDRLKE AHSLFLQRIS KRTKASSLEK VGDDAQATDL ETGFVNPWET STVNGLIHKI KPQLVKYDGY HVSNKVFPGK
201: ANLSSLQNYS RNKIIEIGGR KYQMKGCAGQ GGFAQVFKAF IDSNPDEVVA LKVQKPPFPW EFHMYRQLDC RIPDSQRSSF GLAQRVHVYS DYSILVCDYL
301: SHGTLQDVIN SYVVVGKSME EVLCMYYTIE MLNMLETLHS VGIIHGDFKP DNLLIRYPPE NLTETGFHEK TGSWSKKGLC LVDWGRGIDL SLFPRTTEFT
401: GDCRTSGFRC VEMKEDKPWK FQVDTYGLCV IVHMMLHNVY MEIEKKQSLD GGYINMPRTS FKRYWKVDLW KELFTKLLNR ETCEDDTETL RNLRKSMEEY
501: ICSDPKLMKK LNELLAKQRI SLCSS

Arabidopsis Description

BUB1Mitotic checkpoint serine/threonine-protein kinase BUB1 [Source:UniProtKB/Swiss-Prot;Acc:F4IVI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.