CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13862	Canola	cytosol	93.37	93.19
AT2G20635.1	Thale cress	cytosol	76.71	72.76
PGSC0003DMT400082809	Potato	cytosol, nucleus, plastid	57.03	53.89
VIT_12s0028g03360.t01	Wine grape	nucleus	59.04	53.26
Solyc07g053820.2.1	Tomato	cytosol, nucleus, plastid	56.22	52.93
GSMUA_Achr10P...	Banana	nucleus	40.16	50.89
KRH25625	Soybean	cytosol	53.82	50.47
KRH55929	Soybean	nucleus	52.81	49.72
Zm00001d021588_P002	Maize	cytosol, plastid	49.4	44.32
Os07t0508500-01	Rice	cytosol	49.2	43.75
TraesCS2B01G249400.1	Wheat	plastid	48.19	43.48
TraesCS2A01G226000.1	Wheat	plastid	47.79	43.12
HORVU0Hr1G039990.19	Barley	cytosol, nucleus	24.1	40.0
KXG36289	Sorghum	plastid	47.79	38.51
CDX95868	Canola	cytosol	7.23	25.17
CDY46599	Canola	cytosol	11.85	19.22
CDY27958	Canola	nucleus	12.65	16.2
CDY17186	Canola	nucleus	12.45	15.7
CDY61325	Canola	cytosol	11.65	15.55
CDX70146	Canola	nucleus	11.45	12.58
CDX98847	Canola	nucleus	11.04	12.3
CDY23726	Canola	nucleus	6.83	10.86

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.430	MapMan:13.3.5.5.1	MapMan:18.4.9	GO:A0A078D134	InterPro:Bub1/Mad3
EnsemblPlants:CDX81974	ProteinID:CDX81974	ProteinID:CDX81974.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049
GO:GO:0007094	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00136949001	InterPro:IPR000719	InterPro:IPR013212	InterPro:Kinase-like_dom_sf
InterPro:Mad3/Bub1_I	PFAM:PF00069	PFAM:PF08311	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51489
PANTHER:PTHR14030	PANTHER:PTHR14030:SF6	InterPro:Prot_kinase_dom	SMART:SM00220	SMART:SM00777	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EEA04A	SEG:seg	:	:	:

Description

BnaC08g36270D

Coordinates

chrLK031826:+:1753533..1756267

Molecular Weight (calculated)

57246.7 Da

IEP (calculated)

6.819

GRAVY (calculated)

-0.306

Length

498 amino acids

Sequence
(BLAST)

001: MSSLSSSPTS LGDPLFPWLL KIRKSTEDVC SGRSSGEDLD ELLYECISTH KEDARYRNDV RFLKICFLYL EGSEDFESVY KEVEENEICI GHSLLYEWYA
101: TFLELKGLWI RAHLVYQTGL SREAQPFDRL REAHSFFLQR ISKRTKPSSL VKVGEALFVN PWETSTVDGL ILKIKPQLLK YDGYYATNKA FPSKANLSFL
201: QNFSRNKIID IGGRKYQIKG CAGQGGFAQV FKACIDSNPD EIVALKVQKP PFPLEFHMYR QLDRRISENQ RSSFGLAQRV HMYSDCSILV CDYLSHGTLQ
301: DVINSYVVVG KSMEEVLCMY YTVEMLYMLE TLHSVGIIHG DFKPDNLLIQ YPPKNLTETG FHEKTGSWSN QGLCLVDWGR GIDLSLRTNL GSFRQVDTYG
401: LCVIVHMMLH NTYMEIDKKQ SLDGGHVNLP RTSFKRYWNV DLWKELFTKL LNSETCEDDT ETLRSLRKSM EAYICSDPKL MDKLNELLAK QRVSLCSS

Best Arabidopsis Sequence Match ( AT2G20635.1 )
(BLAST)

001: MTIGYRDAAG DPLFPWLMEI KNSMEDLYAG KNSGYDLDKL LFDCISTYKK DSRYRNDLRF LKIWFLYLEG REDFERVYRE IEETEICKGH SLLYEWYAIF
101: LEVKGLWRRA NSVYQTGLSR KAEPFDRLKE AHSLFLQRIS KRTKASSLEK VGDDAQATDL ETGFVNPWET STVNGLIHKI KPQLVKYDGY HVSNKVFPGK
201: ANLSSLQNYS RNKIIEIGGR KYQMKGCAGQ GGFAQVFKAF IDSNPDEVVA LKVQKPPFPW EFHMYRQLDC RIPDSQRSSF GLAQRVHVYS DYSILVCDYL
301: SHGTLQDVIN SYVVVGKSME EVLCMYYTIE MLNMLETLHS VGIIHGDFKP DNLLIRYPPE NLTETGFHEK TGSWSKKGLC LVDWGRGIDL SLFPRTTEFT
401: GDCRTSGFRC VEMKEDKPWK FQVDTYGLCV IVHMMLHNVY MEIEKKQSLD GGYINMPRTS FKRYWKVDLW KELFTKLLNR ETCEDDTETL RNLRKSMEEY
501: ICSDPKLMKK LNELLAKQRI SLCSS

Arabidopsis Description

BUB1Mitotic checkpoint serine/threonine-protein kinase BUB1 [Source:UniProtKB/Swiss-Prot;Acc:F4IVI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.