CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46599	Canola	cytosol	59.44	27.69
CDY61325	Canola	cytosol	61.54	23.59
CDY27958	Canola	nucleus	60.84	22.36
CDY23726	Canola	nucleus	48.25	22.04
CDY17186	Canola	nucleus	60.84	22.03
AT2G33560.2	Thale cress	nucleus	58.74	21.21
VIT_18s0122g00470.t01	Wine grape	nucleus	44.06	16.54
Bra015240.1-P	Field mustard	nucleus	26.57	16.38
PGSC0003DMT400025922	Potato	cytosol	43.36	16.02
Solyc04g082900.2.1	Tomato	nucleus	41.26	15.17
TraesCS6A01G168100.1	Wheat	nucleus	41.96	15.08
TraesCS6B01G195800.1	Wheat	cytosol	41.26	14.94
Os02t0193600-01	Rice	nucleus	41.26	14.82
TraesCS6D01G157200.1	Wheat	cytosol, nucleus, plastid	40.56	14.72
EES04683	Sorghum	cytosol	39.86	14.07
KRG89179	Soybean	cytosol	37.76	14.06
KRH49504	Soybean	cytoskeleton, cytosol, nucleus	37.76	14.06
HORVU6Hr1G034110.3	Barley	nucleus	39.86	13.9
Zm00001d015863_P001	Maize	cytosol	37.06	13.7
GSMUA_Achr1P16590_001	Banana	nucleus	32.17	10.77
GSMUA_Achr3P11640_001	Banana	endoplasmic reticulum	33.57	10.5
CDX81974	Canola	cytosol	25.17	7.23
CDY13862	Canola	cytosol	25.17	7.21
CDX70146	Canola	nucleus	18.88	5.96
CDX98847	Canola	nucleus	18.18	5.82

Protein Annotations

EnsemblPlants:CDX95868	EnsemblPlantsGene:GSBRNA2T00101832001	Gene3D:1.25.40.430	GO:A0A078E8Z1	GO:GO:0007049	GO:GO:0007094
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:Bub1/Mad3	InterPro:IPR013212	InterPro:Mad3/Bub1_I
PANTHER:PTHR14030	PANTHER:PTHR14030:SF4	PFAM:PF08311	PFscan:PS51489	ProteinID:CDX95868	ProteinID:CDX95868.1
SMART:SM00777	UniParc:UPI0004EEAB32	MapMan:35.1	:	:	:

Description

BnaC05g36190D

Coordinates

chrLK031891:-:827375..828063

Molecular Weight (calculated)

16883.5 Da

IEP (calculated)

10.286

GRAVY (calculated)

-0.497

Length

143 amino acids

Sequence
(BLAST)

001: MGAGGVSSGW RVLGSVGDIR AVREKFWHSD RYKDDLRYLK FTRGKWFILL KAEHCADAEV IYKFLEVNDI GRTHGLYYRD YGLNMEYKGK VKTANEIFNL
101: RISRNAKPVE KLNDAYKKFM VRTMRRTKTV DDIRSFFCKF IYA

Best Arabidopsis Sequence Match ( AT2G33560.1 )
(BLAST)

001: MAAETKVQVS DPEAEFLNSK QETGYEWELF KENVRPLKRG RNVGILNHAL KSHSDHQLRK NLIEKRRNLI EAIDEYEGDD PLSPWIECIK WVQEAFPPGG
101: ECSGLLVIYE QCVRKFWHSE RYKDDLRYLK VWLEYAEHCA DAEVIYKFLE VNEIGKTHAV YYIAYALHIE FKNKVKTANE IFNLGISRDA KPVEKLNDAY
201: KKFMVRTMRR SNTADEEPKE NNDLPSRSFG TLLSRGDNNA RRQALGSSNP QAKKLKPNQS SKTPFAIYAD AVSDTTSGNQ PESDKSRPEF GSWLMLGGRA
301: ERNKENNSLP RKWASFKVPQ KPIVRTVAAA SASTFEVFVD EEECTEEEEE KKKNDETISS SSNVLPLNGG REIKKETELL RQNPLRHFPP NSFLR

Arabidopsis Description

BUBR1BUBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VU51]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.