Factsheet for TraesCS6D01G157200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G168100.1	Wheat	nucleus	94.67	93.72
TraesCS6B01G195800.1	Wheat	cytosol	93.15	92.91
HORVU6Hr1G034110.3	Barley	nucleus	76.4	73.41
Os02t0193600-01	Rice	nucleus	71.32	70.6
Zm00001d015863_P001	Maize	cytosol	63.45	64.6
EES04683	Sorghum	cytosol	64.72	62.96
VIT_18s0122g00470.t01	Wine grape	nucleus	49.24	50.92
PGSC0003DMT400025922	Potato	cytosol	49.75	50.65
Solyc04g082900.2.1	Tomato	nucleus	48.98	49.61
KRH49504	Soybean	cytoskeleton, cytosol, nucleus	47.97	49.22
KRG89179	Soybean	cytosol	47.21	48.44
GSMUA_Achr1P16590_001	Banana	nucleus	51.78	47.78
AT2G33560.2	Thale cress	nucleus	46.7	46.46
GSMUA_Achr3P11640_001	Banana	endoplasmic reticulum	53.3	45.95
CDY17186	Canola	nucleus	45.69	45.57
Bra005485.1-P	Field mustard	nucleus	42.89	45.19
CDY27958	Canola	nucleus	44.42	44.99
CDX95868	Canola	cytosol	14.72	40.56
CDY46599	Canola	cytosol	31.22	40.07
CDY23726	Canola	nucleus	25.89	32.59
CDY61325	Canola	cytosol	29.95	31.64
Bra015240.1-P	Field mustard	nucleus	16.75	28.45
TraesCS5D01G149700.1	Wheat	plastid	17.26	10.32

Protein Annotations

EnsemblPlants:TraesCS6D01G157200.1	EnsemblPlantsGene:TraesCS6D01G157200	Gene3D:1.25.40.430	GO:GO:0007049	GO:GO:0007094	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:Bub1/Mad3	InterPro:IPR013212	InterPro:Mad3/Bub1_I	PANTHER:PTHR14030
PANTHER:PTHR14030:SF4	PFAM:PF08311	PFscan:PS51489	SEG:seg	SMART:SM00777	MapMan:13.3.5.5.5

Description

No Description!

Coordinates

chr6D:-:133226783..133229406

Molecular Weight (calculated)

44569.1 Da

IEP (calculated)

9.071

GRAVY (calculated)

-0.643

Length

394 amino acids

Sequence
(BLAST)

001: MAAAAARDLA ALDAETLALL GGGPDMAPVA VCGEWETFKE NVRPLKRGRN VGLLNQALKA HTDPAQRAAL LAERRRMIEA TEEYQGEDPL QPWVECIKWV
101: QESFPAGGEF SGLVVIYEQC VRAFWHDERY KDDLRYLKVW LEYAGNCSDA EVIFRFLESN QIGEGHAVFY IRYASLMESK NKLKKADEIF NLGIARKAKP
201: VEKLETTYRA FLGRSTRKKE HEDDTASDDQ PVRKFGSDLN RGETRGQHAE NSHLLAKPRV KLQRIDVNTP ISIYKENPLP SQGLERARSK DRVWNTLGTQ
301: ADRNKENNMM PARWTSHKIP PKVAARPAVL PARVNSIEVF VDEECAEEPA PSQVPKSPKP SVLKLRQATS KNLKKETELL KENPLRNFPL SSLR

Best Arabidopsis Sequence Match ( AT2G33560.1 )
(BLAST)

001: MAAETKVQVS DPEAEFLNSK QETGYEWELF KENVRPLKRG RNVGILNHAL KSHSDHQLRK NLIEKRRNLI EAIDEYEGDD PLSPWIECIK WVQEAFPPGG
101: ECSGLLVIYE QCVRKFWHSE RYKDDLRYLK VWLEYAEHCA DAEVIYKFLE VNEIGKTHAV YYIAYALHIE FKNKVKTANE IFNLGISRDA KPVEKLNDAY
201: KKFMVRTMRR SNTADEEPKE NNDLPSRSFG TLLSRGDNNA RRQALGSSNP QAKKLKPNQS SKTPFAIYAD AVSDTTSGNQ PESDKSRPEF GSWLMLGGRA
301: ERNKENNSLP RKWASFKVPQ KPIVRTVAAA SASTFEVFVD EEECTEEEEE KKKNDETISS SSNVLPLNGG REIKKETELL RQNPLRHFPP NSFLR

Arabidopsis Description

BUBR1BUBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VU51]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.