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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY17186 Canola nucleus 73.99 74.18
CDY27958 Canola nucleus 71.97 73.26
Bra005485.1-P Field mustard nucleus 66.67 70.59
CDY46599 Canola cytosol 52.02 67.1
CDX95868 Canola cytosol 21.21 58.74
VIT_18s0122g00470.t01 Wine grape nucleus 54.04 56.17
PGSC0003DMT400025922 Potato cytosol 54.8 56.07
CDY23726 Canola nucleus 43.94 55.59
Solyc04g082900.2.1 Tomato nucleus 54.55 55.53
KRH49504 Soybean cytoskeleton, cytosol, nucleus 53.03 54.69
KRG89179 Soybean cytosol 53.03 54.69
Bra015240.1-P Field mustard nucleus 29.04 49.57
CDY61325 Canola cytosol 45.96 48.79
Zm00001d015863_P001 Maize cytosol 46.72 47.8
Os02t0193600-01 Rice nucleus 47.73 47.49
TraesCS6D01G157200.1 Wheat cytosol, nucleus, plastid 46.46 46.7
TraesCS6B01G195800.1 Wheat cytosol 46.46 46.58
EES04683 Sorghum cytosol 47.22 46.17
TraesCS6A01G168100.1 Wheat nucleus 45.96 45.73
GSMUA_Achr1P16590_001 Banana nucleus 46.21 42.86
GSMUA_Achr3P11640_001 Banana endoplasmic reticulum 44.95 38.95
HORVU6Hr1G034110.3 Barley nucleus 39.14 37.8
AT5G05510.1 Thale cress nucleus 16.16 13.59
AT2G20635.1 Thale cress cytosol 15.66 11.81
Protein Annotations
Gene3D:1.25.40.430MapMan:13.3.5.5.5EntrezGene:817921UniProt:A0A178VU51ProteinID:AEC08853.1ArrayExpress:AT2G33560
EnsemblPlantsGene:AT2G33560RefSeq:AT2G33560TAIR:AT2G33560RefSeq:AT2G33560-TAIR-GEnsemblPlants:AT2G33560.2TAIR:AT2G33560.2
Unigene:At.37908Symbol:BUBR1InterPro:Bub1/Mad3ncoils:CoilGO:GO:0007049GO:GO:0007094
GO:GO:0008150GO:GO:0009987GO:GO:0016043InterPro:IPR013212InterPro:Mad3/Bub1_IRefSeq:NP_001189668.1
ProteinID:OAP08382.1PFAM:PF08311PO:PO:0000016PO:PO:0000037PO:PO:0000293PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0006085PO:PO:0006308PO:PO:0007611
PO:PO:0007616PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009031PO:PO:0009046PO:PO:0009052PO:PO:0025022PFscan:PS51489PANTHER:PTHR14030
PANTHER:PTHR14030:SF4SMART:SM00777UniParc:UPI0001E92CF7SEG:seg::
Description
BUBR1BUBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VU51]
Coordinates
chr2:-:14213604..14216054
Molecular Weight (calculated)
45504.5 Da
IEP (calculated)
7.223
GRAVY (calculated)
-0.829
Length
396 amino acids
Sequence
(BLAST)
001: MAAETKVQVS DPEAEFLNSK QETGYEWELF KENVRPLKRG RNVGILNHAL KSHSDHQLRK NLIEKRRNLI EAIDEYEGDD PLSPWIECIK WVQEAFPPGG
101: ECSGLLVIYE QCVRKFWHSE RYKDDLRYLK VWLEYAEHCA DAEVIYKFLE VNEIGKTHAV YYIAYALHIE FKNKVKTANE IFNLGISRDA KPVEKLNDAY
201: KKFMVRTMRR SNTADEQEPK ENNDLPSRSF GTLLSRGDNN ARRQALGSSN PQAKKLKPNQ SSKTPFAIYA DAVSDTTSGN QPESDKSRPE FGSWLMLGGR
301: AERNKENNSL PRKWASFKVP QKPIVRTVAA ASASTFEVFV DEEECTEEEE EKKKNDETIS SSSNVLPLNG GREIKKETEL LRQNPLRHFP PNSFLR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.