Factsheet for Bra005485.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27958	Canola	nucleus	88.77	85.35
CDY17186	Canola	nucleus	89.3	84.56
AT2G33560.2	Thale cress	nucleus	70.59	66.67
VIT_18s0122g00470.t01	Wine grape	nucleus	54.01	53.02
PGSC0003DMT400025922	Potato	cytosol	54.55	52.71
Solyc04g082900.2.1	Tomato	nucleus	53.48	51.41
KRH49504	Soybean	cytoskeleton, cytosol, nucleus	52.67	51.3
KRG89179	Soybean	cytosol	52.41	51.04
Bra015240.1-P	Field mustard	nucleus	31.28	50.43
Zm00001d015863_P001	Maize	cytosol	46.79	45.22
TraesCS6B01G195800.1	Wheat	cytosol	46.52	44.05
Os02t0193600-01	Rice	nucleus	46.26	43.47
TraesCS6A01G168100.1	Wheat	nucleus	45.72	42.96
EES04683	Sorghum	cytosol	46.52	42.96
TraesCS6D01G157200.1	Wheat	cytosol, nucleus, plastid	45.19	42.89
GSMUA_Achr1P16590_001	Banana	nucleus	44.12	38.64
GSMUA_Achr3P11640_001	Banana	endoplasmic reticulum	44.38	36.32
HORVU6Hr1G034110.3	Barley	nucleus	38.5	35.12
Bra009117.1-P	Field mustard	nucleus	17.11	14.13
Bra031135.1-P	Field mustard	cytosol	16.84	13.26

Protein Annotations

EnsemblPlants:Bra005485.1	EnsemblPlants:Bra005485.1-P	EnsemblPlantsGene:Bra005485	Gene3D:1.25.40.430	GO:GO:0007049	GO:GO:0007094
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:Bub1/Mad3	InterPro:IPR013212	InterPro:Mad3/Bub1_I
ncoils:Coil	PANTHER:PTHR14030	PANTHER:PTHR14030:SF4	PFAM:PF08311	PFscan:PS51489	SEG:seg
SMART:SM00777	UniParc:UPI0002547316	UniProt:M4CMP7	MapMan:13.3.5.5.5	:	:

Description

AT2G33560 (E=2e-163) | spindle checkpoint protein-related

Coordinates

chrA05:+:5764914..5766847

Molecular Weight (calculated)

43086.6 Da

IEP (calculated)

7.562

GRAVY (calculated)

-0.922

Length

374 amino acids

Sequence
(BLAST)

001: MAETRVEISD PESEFFASKQ ETGHEWELFK ENVRPLKRGR NVRLLNHALK SHTDHQLRKT LVEKRRKLIE EIDEYDGDDP LFPWIQCIKW VQEAFPPGGE
101: CSGLLVIYEQ CVRKFWHSER YKDDLRYLKV WLEYAEHCAD AEVIYKFLEV NEIGKTHALY YIAYALHMEF KSKVKTANEI FNLGISRNAK PVEKLNDAYK
201: KFMVRTMRRP NTADEEPKEN NNDLPSRSFG TVLSRVDNNN TGRQALGPQA KKPKLNQSSK APLSIYTDTT SGNQQQESDK SRPEYGSWLM LGGRAERNKE
301: NNSLPGKWKT FKVPQKPVVR TPAAATASSF EVFVDEEEEE ECTEEGGEKK KKSETNSSSS SNALPLNDGR EIKK

Best Arabidopsis Sequence Match ( AT2G33560.1 )
(BLAST)

001: MAAETKVQVS DPEAEFLNSK QETGYEWELF KENVRPLKRG RNVGILNHAL KSHSDHQLRK NLIEKRRNLI EAIDEYEGDD PLSPWIECIK WVQEAFPPGG
101: ECSGLLVIYE QCVRKFWHSE RYKDDLRYLK VWLEYAEHCA DAEVIYKFLE VNEIGKTHAV YYIAYALHIE FKNKVKTANE IFNLGISRDA KPVEKLNDAY
201: KKFMVRTMRR SNTADEEPKE NNDLPSRSFG TLLSRGDNNA RRQALGSSNP QAKKLKPNQS SKTPFAIYAD AVSDTTSGNQ PESDKSRPEF GSWLMLGGRA
301: ERNKENNSLP RKWASFKVPQ KPIVRTVAAA SASTFEVFVD EEECTEEEEE KKKNDETISS SSNVLPLNGG REIKKETELL RQNPLRHFPP NSFLR

Arabidopsis Description

BUBR1BUBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VU51]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.