CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49504	Soybean	cytoskeleton, cytosol, nucleus	94.27	94.27
VIT_18s0122g00470.t01	Wine grape	nucleus	62.24	62.73
PGSC0003DMT400025922	Potato	cytosol	59.11	58.66
Solyc04g082900.2.1	Tomato	nucleus	57.81	57.07
CDY27958	Canola	nucleus	55.21	54.5
CDY17186	Canola	nucleus	55.47	53.92
AT2G33560.2	Thale cress	nucleus	54.69	53.03
Bra005485.1-P	Field mustard	nucleus	51.04	52.41
Zm00001d015863_P001	Maize	cytosol	49.48	49.1
Os02t0193600-01	Rice	nucleus	49.74	47.99
TraesCS6A01G168100.1	Wheat	nucleus	48.96	47.24
CDY46599	Canola	cytosol	37.76	47.23
TraesCS6D01G157200.1	Wheat	cytosol, nucleus, plastid	48.44	47.21
TraesCS6B01G195800.1	Wheat	cytosol	48.44	47.09
GSMUA_Achr1P16590_001	Banana	nucleus	52.34	47.07
EES04683	Sorghum	cytosol	48.7	46.17
GSMUA_Achr3P11640_001	Banana	endoplasmic reticulum	51.04	42.89
CDY23726	Canola	nucleus	32.29	39.62
HORVU6Hr1G034110.3	Barley	nucleus	41.15	38.54
CDX95868	Canola	cytosol	14.06	37.76
CDY61325	Canola	cytosol	33.33	34.32
Bra015240.1-P	Field mustard	nucleus	18.49	30.6
KRH55929	Soybean	nucleus	16.93	12.29
KRH25625	Soybean	cytosol	16.93	12.24
KRG97697	Soybean	nucleus	15.89	11.69
KRH31175	Soybean	nucleus	15.89	11.6

Protein Annotations

Gene3D:1.25.40.430	EntrezGene:100783684	MapMan:13.3.5.5.5	EMBL:ACUP02012190	InterPro:Bub1/Mad3	EnsemblPlantsGene:GLYMA_20G006600
GO:GO:0000003	GO:GO:0000778	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049
GO:GO:0007094	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0051754	UniProt:I1ND06	InterPro:IPR013212	EnsemblPlants:KRG89179
ProteinID:KRG89179	ProteinID:KRG89179.1	InterPro:Mad3/Bub1_I	PFAM:PF08311	PFscan:PS51489	PANTHER:PTHR14030
PANTHER:PTHR14030:SF4	SMART:SM00777	UniParc:UPI000233E069	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:649471..653167

Molecular Weight (calculated)

43659.5 Da

IEP (calculated)

9.346

GRAVY (calculated)

-0.770

Length

384 amino acids

Sequence
(BLAST)

001: MAEAEMEKIT TIDPETEFLA SKRKNGNEWE TFKENVRPLK RGRNVNLLNH ALNSHTDNQL KKSLVQQRSK LIQAIQEYQG DDPLLPWIQC IKWVQEAFPP
101: GGDSSGLVVI YEQCVRAFWH SERYKDDLRY LKVWLEYADN CFDADVIYAF LDANGIGKPH SIFYISYALH LESKNKFKAA NQMLELGISR NAQPIEKLKA
201: AYRQFFARSM ARPIAIDDSV EKLAPTRSFG TVLAKGENRA PLSILNSNRD PSAKNDRTRA APLSIYKDSA DTGDTDPHKP DPSHSWHTLG ARADRNKENN
301: AIPGKWKSYK VPQRPGTRVG GATPSAFIPV FVDEECQDSQ SKKAEGCKSS SLKIRQEDDK ELKRETELLR KNPLRNFPQN SLPR

Best Arabidopsis Sequence Match ( AT2G33560.2 )
(BLAST)

001: MAAETKVQVS DPEAEFLNSK QETGYEWELF KENVRPLKRG RNVGILNHAL KSHSDHQLRK NLIEKRRNLI EAIDEYEGDD PLSPWIECIK WVQEAFPPGG
101: ECSGLLVIYE QCVRKFWHSE RYKDDLRYLK VWLEYAEHCA DAEVIYKFLE VNEIGKTHAV YYIAYALHIE FKNKVKTANE IFNLGISRDA KPVEKLNDAY
201: KKFMVRTMRR SNTADEQEPK ENNDLPSRSF GTLLSRGDNN ARRQALGSSN PQAKKLKPNQ SSKTPFAIYA DAVSDTTSGN QPESDKSRPE FGSWLMLGGR
301: AERNKENNSL PRKWASFKVP QKPIVRTVAA ASASTFEVFV DEEECTEEEE EKKKNDETIS SSSNVLPLNG GREIKKETEL LRQNPLRHFP PNSFLR

Arabidopsis Description

BUBR1BUBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VU51]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.