Factsheet for TraesCS6B01G195800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
MultiLoc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G168100.1	Wheat	nucleus	95.19	94.47
TraesCS6D01G157200.1	Wheat	cytosol, nucleus, plastid	92.91	93.15
HORVU6Hr1G034110.3	Barley	nucleus	76.96	74.15
Os02t0193600-01	Rice	nucleus	71.39	70.85
Zm00001d015863_P001	Maize	cytosol	63.54	64.86
EES04683	Sorghum	cytosol	64.05	62.47
VIT_18s0122g00470.t01	Wine grape	nucleus	49.37	51.18
PGSC0003DMT400025922	Potato	cytosol	49.37	50.39
Solyc04g082900.2.1	Tomato	nucleus	48.86	49.61
KRH49504	Soybean	cytoskeleton, cytosol, nucleus	47.85	49.22
KRG89179	Soybean	cytosol	47.09	48.44
GSMUA_Achr1P16590_001	Banana	nucleus	50.63	46.84
Bra005485.1-P	Field mustard	nucleus	44.05	46.52
AT2G33560.2	Thale cress	nucleus	46.58	46.46
CDY17186	Canola	nucleus	46.33	46.33
CDY27958	Canola	nucleus	45.32	46.02
GSMUA_Achr3P11640_001	Banana	endoplasmic reticulum	52.66	45.51
CDX95868	Canola	cytosol	14.94	41.26
CDY46599	Canola	cytosol	31.39	40.39
CDY23726	Canola	nucleus	26.84	33.87
CDY61325	Canola	cytosol	30.38	32.17
Bra015240.1-P	Field mustard	nucleus	16.46	28.02
TraesCS5B01G141100.1	Wheat	nucleus, plastid	16.46	9.85
TraesCS2B01G249400.1	Wheat	plastid	12.91	9.24

Protein Annotations

EnsemblPlants:TraesCS6B01G195800.1	EnsemblPlantsGene:TraesCS6B01G195800	Gene3D:1.25.40.430	GO:GO:0007049	GO:GO:0007094	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:Bub1/Mad3	InterPro:IPR013212	InterPro:Mad3/Bub1_I	ncoils:Coil
PANTHER:PTHR14030	PANTHER:PTHR14030:SF4	PFAM:PF08311	PFscan:PS51489	SEG:seg	SMART:SM00777
MapMan:13.3.5.5.5	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:231683121..231685677

Molecular Weight (calculated)

44634.4 Da

IEP (calculated)

9.249

GRAVY (calculated)

-0.607

Length

395 amino acids

Sequence
(BLAST)

001: MAVAAAAGDL AVLDAETLAL LGGGPDMAPV AVCGEWETFK ENVRPLKRGR NVGLLNQALK AHTDPAQRAA LLAERRRMIE AIEEYQGEDP LQPWVDCIKW
101: VQESFPAGGE FSGLVVIYEQ CVRAFWHDER YKDDLRYLKV WLEYAGNCSD AEVIFRFLES NRIGEGHAVF YIRYALLMES KNKVKKVDEI FNLGIARKAK
201: PVEKLETTYR AFLGRSTRKK EHEDDTASDD PPVRKFGSDL NRGETRGQHA ENSHMLAKPR VKLQRIDVNT PISIYKENPL PSQGLERARS KDRAWNTLGT
301: QADRNKENNM MPARWTSHKI PPKVAARQAV PPARVSSIEV FVDEECAEEP APPRVPKSPK PSVLKLRQAT SKNLKKESEL LKENPLRNFP LSSLR

Best Arabidopsis Sequence Match ( AT2G33560.1 )
(BLAST)

001: MAAETKVQVS DPEAEFLNSK QETGYEWELF KENVRPLKRG RNVGILNHAL KSHSDHQLRK NLIEKRRNLI EAIDEYEGDD PLSPWIECIK WVQEAFPPGG
101: ECSGLLVIYE QCVRKFWHSE RYKDDLRYLK VWLEYAEHCA DAEVIYKFLE VNEIGKTHAV YYIAYALHIE FKNKVKTANE IFNLGISRDA KPVEKLNDAY
201: KKFMVRTMRR SNTADEEPKE NNDLPSRSFG TLLSRGDNNA RRQALGSSNP QAKKLKPNQS SKTPFAIYAD AVSDTTSGNQ PESDKSRPEF GSWLMLGGRA
301: ERNKENNSLP RKWASFKVPQ KPIVRTVAAA SASTFEVFVD EEECTEEEEE KKKNDETISS SSNVLPLNGG REIKKETELL RQNPLRHFPP NSFLR

Arabidopsis Description

BUBR1BUBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VU51]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.