CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89179	Soybean	cytosol	94.27	94.27
VIT_18s0122g00470.t01	Wine grape	nucleus	61.72	62.2
PGSC0003DMT400025922	Potato	cytosol	58.85	58.4
Solyc04g082900.2.1	Tomato	nucleus	58.07	57.33
CDY27958	Canola	nucleus	55.47	54.76
CDY17186	Canola	nucleus	55.99	54.43
AT2G33560.2	Thale cress	nucleus	54.69	53.03
Bra005485.1-P	Field mustard	nucleus	51.3	52.67
Zm00001d015863_P001	Maize	cytosol	49.74	49.35
Os02t0193600-01	Rice	nucleus	50.26	48.49
TraesCS6D01G157200.1	Wheat	cytosol, nucleus, plastid	49.22	47.97
TraesCS6B01G195800.1	Wheat	cytosol	49.22	47.85
CDY46599	Canola	cytosol	38.02	47.56
TraesCS6A01G168100.1	Wheat	nucleus	48.96	47.24
GSMUA_Achr1P16590_001	Banana	nucleus	52.08	46.84
EES04683	Sorghum	cytosol	48.7	46.17
GSMUA_Achr3P11640_001	Banana	endoplasmic reticulum	51.3	43.11
CDY23726	Canola	nucleus	33.33	40.89
HORVU6Hr1G034110.3	Barley	nucleus	41.41	38.78
CDX95868	Canola	cytosol	14.06	37.76
CDY61325	Canola	cytosol	33.85	34.85
Bra015240.1-P	Field mustard	nucleus	18.49	30.6
KRH31175	Soybean	nucleus	16.41	11.98
KRH55929	Soybean	nucleus	16.41	11.91
KRG97697	Soybean	nucleus	16.15	11.88
KRH25625	Soybean	cytosol	16.41	11.86

Protein Annotations

Gene3D:1.25.40.430	EntrezGene:100799090	MapMan:13.3.5.5.5	EMBL:ACUP02004386	EMBL:BT097142	InterPro:Bub1/Mad3
UniProt:C6THL9	ncoils:Coil	EnsemblPlantsGene:GLYMA_07G159700	GO:GO:0000003	GO:GO:0000778	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0007094	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016043	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0051754
InterPro:IPR013212	EnsemblPlants:KRH49504	ProteinID:KRH49504	ProteinID:KRH49504.1	InterPro:Mad3/Bub1_I	PFAM:PF08311
PFscan:PS51489	PANTHER:PTHR14030	PANTHER:PTHR14030:SF4	SMART:SM00777	UniParc:UPI0001B16701	:

Description

hypothetical protein

Coordinates

chr7:+:20423925..20428443

Molecular Weight (calculated)

43745.7 Da

IEP (calculated)

8.342

GRAVY (calculated)

-0.726

Length

384 amino acids

Sequence
(BLAST)

001: MAETEIEKIT TIDPETEFLA SKIRNGNEWE TFKENVRPLK RGRNVNLLNH ALNSHTDNEL KKSLMEQRRK LIEAIEEYQG DDPLLPWIQC IKWVQEAFPP
101: GGDSSGLVVI YEQCVRAFWH SELYKDDLRY LKVWLEYADN CFDADVIYAF LDANGIGKTH SIFYISYALH LESKNKFKAA NQMMELGISR NAQPVDKLKA
201: AYRQFFARSM ARPIAIDDAV EKLAPTRSFG TVLAKGENRA PLSILNSNRD PCAKNDRTRA APLSIYKDSA DTGDTDPHKP DLSHSWHTLG ARADRNKENN
301: AIPGKWKSYK IPQRPGTRTG GATASAFIPV FVDEECQDSQ SKKAEGCKSS NLKIRQEDDK ELKRETELLR KNPLRNFPQN SLPR

Best Arabidopsis Sequence Match ( AT2G33560.2 )
(BLAST)

001: MAAETKVQVS DPEAEFLNSK QETGYEWELF KENVRPLKRG RNVGILNHAL KSHSDHQLRK NLIEKRRNLI EAIDEYEGDD PLSPWIECIK WVQEAFPPGG
101: ECSGLLVIYE QCVRKFWHSE RYKDDLRYLK VWLEYAEHCA DAEVIYKFLE VNEIGKTHAV YYIAYALHIE FKNKVKTANE IFNLGISRDA KPVEKLNDAY
201: KKFMVRTMRR SNTADEQEPK ENNDLPSRSF GTLLSRGDNN ARRQALGSSN PQAKKLKPNQ SSKTPFAIYA DAVSDTTSGN QPESDKSRPE FGSWLMLGGR
301: AERNKENNSL PRKWASFKVP QKPIVRTVAA ASASTFEVFV DEEECTEEEE EKKKNDETIS SSSNVLPLNG GREIKKETEL LRQNPLRHFP PNSFLR

Arabidopsis Description

BUBR1BUBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VU51]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.