Factsheet for GSMUA_Achr3P11640_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P16590_001	Banana	nucleus	59.08	63.23
EES04683	Sorghum	cytosol	47.48	53.58
TraesCS6D01G157200.1	Wheat	cytosol, nucleus, plastid	45.95	53.3
Os02t0193600-01	Rice	nucleus	46.17	53.02
Zm00001d015863_P001	Maize	cytosol	44.64	52.71
TraesCS6B01G195800.1	Wheat	cytosol	45.51	52.66
TraesCS6A01G168100.1	Wheat	nucleus	45.73	52.51
KRH49504	Soybean	cytoskeleton, cytosol, nucleus	43.11	51.3
KRG89179	Soybean	cytosol	42.89	51.04
VIT_18s0122g00470.t01	Wine grape	nucleus	41.58	49.87
PGSC0003DMT400025922	Potato	cytosol	42.01	49.61
Solyc04g082900.2.1	Tomato	nucleus	40.92	48.07
CDY27958	Canola	nucleus	38.51	45.24
HORVU6Hr1G034110.3	Barley	nucleus	40.48	45.12
AT2G33560.2	Thale cress	nucleus	38.95	44.95
CDY17186	Canola	nucleus	38.51	44.56
Bra005485.1-P	Field mustard	nucleus	36.32	44.38
CDY46599	Canola	cytosol	26.7	39.74
CDX95868	Canola	cytosol	10.5	33.57
CDY23726	Canola	nucleus	22.1	32.27
CDY61325	Canola	cytosol	26.04	31.9
Bra015240.1-P	Field mustard	nucleus	13.79	27.16
GSMUA_Achr5P14270_001	Banana	cytosol	14.44	12.27
GSMUA_Achr10P...	Banana	nucleus	4.81	5.6

Protein Annotations

EnsemblPlants:GSMUA_Achr3P11640_001	EnsemblPlants:GSMUA_Achr3T11640_001	EnsemblPlantsGene:GSMUA_Achr3G11640_001	Gene3D:1.25.40.430	GO:GO:0007049	GO:GO:0007094
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:Bub1/Mad3	InterPro:IPR013212	InterPro:Mad3/Bub1_I
PANTHER:PTHR14030	PANTHER:PTHR14030:SF4	PFAM:PF08311	PFscan:PS51489	SEG:seg	SignalP:SignalP-noTM
SMART:SM00777	UniParc:UPI000294E01B	UniProt:M0SDT1	MapMan:13.3.5.5.5	:	:

Description

Mad3/BUB1 homology region 1 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G11640_001]

Coordinates

chr3:+:8651234..8655628

Molecular Weight (calculated)

51893.7 Da

IEP (calculated)

8.005

GRAVY (calculated)

-0.473

Length

457 amino acids

Sequence
(BLAST)

001: MSVLFSMAFF CIEMLLIILS EVVGVEEPQQ MEATSFAAAA AGEAETALLV ADADPETAFL QQKDGGVATG RGFEWEVYKE NVRPLKRGRD VKLLNHALRS
101: QVDRSLNASL LRTRRHSSLF APSLRLSLLP GSFLEIDRWR MIEAIDEYQG EDPLQPWLRC IKWVQESFPT GGECSGLIVM YEQCVRTFWH DDRYRDDLRY
201: LRVWLEYADN CEDAEVIFQF LEANQIGQSH SIFYTSYAMH LESKNKLRKA DEILNLGLAR KARSLVKLED AYRTFLVRST QKKHGNDEGL ADHPLPIRSF
301: GTVLTSAESR RQPAENFGQS KRMVALQRID TNKPLTIYKD ANTGANDQCS NLKANERSWS TLGSRSDRSK ENVSIPKKWS SYKVPQKIGQ RTGSATSSTC
401: IEVYVDEECA ESPPAKVAKN LNSSVLKLRQ ATSQNLKNET EMLKVNPLRN FHLHSLR

Best Arabidopsis Sequence Match ( AT2G33560.1 )
(BLAST)

001: MAAETKVQVS DPEAEFLNSK QETGYEWELF KENVRPLKRG RNVGILNHAL KSHSDHQLRK NLIEKRRNLI EAIDEYEGDD PLSPWIECIK WVQEAFPPGG
101: ECSGLLVIYE QCVRKFWHSE RYKDDLRYLK VWLEYAEHCA DAEVIYKFLE VNEIGKTHAV YYIAYALHIE FKNKVKTANE IFNLGISRDA KPVEKLNDAY
201: KKFMVRTMRR SNTADEEPKE NNDLPSRSFG TLLSRGDNNA RRQALGSSNP QAKKLKPNQS SKTPFAIYAD AVSDTTSGNQ PESDKSRPEF GSWLMLGGRA
301: ERNKENNSLP RKWASFKVPQ KPIVRTVAAA SASTFEVFVD EEECTEEEEE KKKNDETISS SSNVLPLNGG REIKKETELL RQNPLRHFPP NSFLR

Arabidopsis Description

BUBR1BUBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VU51]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.