Factsheet for Solyc04g082900.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400025922	Potato	cytosol	89.72	90.18
VIT_18s0122g00470.t01	Wine grape	nucleus	61.95	63.25
KRH49504	Soybean	cytoskeleton, cytosol, nucleus	57.33	58.07
KRG89179	Soybean	cytosol	57.07	57.81
CDY27958	Canola	nucleus	55.01	55.01
AT2G33560.2	Thale cress	nucleus	55.53	54.55
CDY17186	Canola	nucleus	55.01	54.18
Bra005485.1-P	Field mustard	nucleus	51.41	53.48
Os02t0193600-01	Rice	nucleus	50.13	48.99
TraesCS6D01G157200.1	Wheat	cytosol, nucleus, plastid	49.61	48.98
TraesCS6B01G195800.1	Wheat	cytosol	49.61	48.86
Zm00001d015863_P001	Maize	cytosol	48.33	48.58
TraesCS6A01G168100.1	Wheat	nucleus	49.61	48.49
CDY46599	Canola	cytosol	37.79	47.88
EES04683	Sorghum	cytosol	48.07	46.17
GSMUA_Achr1P16590_001	Banana	nucleus	49.36	44.96
CDY23726	Canola	nucleus	33.93	42.17
CDX95868	Canola	cytosol	15.17	41.26
GSMUA_Achr3P11640_001	Banana	endoplasmic reticulum	48.07	40.92
HORVU6Hr1G034110.3	Barley	nucleus	42.42	40.24
CDY61325	Canola	cytosol	34.7	36.19
Bra015240.1-P	Field mustard	nucleus	19.28	32.33
Solyc07g053820.2.1	Tomato	cytosol, nucleus, plastid	17.74	13.04
Solyc06g051040.2.1	Tomato	cytosol, nucleus, plastid	17.99	11.9

Protein Annotations

Gene3D:1.25.40.430	MapMan:13.3.5.5.5	InterPro:Bub1/Mad3	GO:GO:0000003	GO:GO:0000778	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0007094
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0051754	InterPro:IPR011990	InterPro:IPR013212	UniProt:K4BW16	InterPro:Mad3/Bub1_I
PFAM:PF08311	PFscan:PS51489	PANTHER:PTHR14030	PANTHER:PTHR14030:SF4	SMART:SM00777	SUPFAM:SSF48452
EnsemblPlantsGene:Solyc04g082900.2	EnsemblPlants:Solyc04g082900.2.1	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002766A46	:	:

Description

Mitotic spindle checkpoint protein BUBR1 [Source:Projected from Arabidopsis thaliana (AT2G33560) UniProtKB/Swiss-Prot;Acc:O22806]

Coordinates

chr4:-:66394566..66399116

Molecular Weight (calculated)

44629.9 Da

IEP (calculated)

8.705

GRAVY (calculated)

-0.767

Length

389 amino acids

Sequence
(BLAST)

001: MEKVGGDYVL DKEAEFLASK QETGHEWELF KENVRPLKRG RNVNLLNNAL KSSTDYQLKK SLLDKRREFI EAIDKYKGED PLHPWLQCIK WVQEAFPPGG
101: DSSGLIVIYE QCVRTFWHDE LYKNDLRYLK VWLEYAENCM DAEVIYSFLE ANKIGLTHSS FYIAYALHME SQNKIKTANE IFNRGLSMNA EPEEKLKVSY
201: KKFFSRSMGR PKAAEEEITE HQLPMRSFGT LLARGEARNQ TTGTSELSRK KMKPDRAQGS LFSIYKDANA GMSSTLQSEI PKLENTSWHC LGARADRNKE
301: NQAIPSKWTS NKIPQRHGLR NRGATTTTTP CLEIFVDEEC AKAQEKDSAA GVKASSLQLR RGDDKDIKKE TELLRENPLR YFPPSSLPR

Best Arabidopsis Sequence Match ( AT2G33560.1 )
(BLAST)

001: MAAETKVQVS DPEAEFLNSK QETGYEWELF KENVRPLKRG RNVGILNHAL KSHSDHQLRK NLIEKRRNLI EAIDEYEGDD PLSPWIECIK WVQEAFPPGG
101: ECSGLLVIYE QCVRKFWHSE RYKDDLRYLK VWLEYAEHCA DAEVIYKFLE VNEIGKTHAV YYIAYALHIE FKNKVKTANE IFNLGISRDA KPVEKLNDAY
201: KKFMVRTMRR SNTADEEPKE NNDLPSRSFG TLLSRGDNNA RRQALGSSNP QAKKLKPNQS SKTPFAIYAD AVSDTTSGNQ PESDKSRPEF GSWLMLGGRA
301: ERNKENNSLP RKWASFKVPQ KPIVRTVAAA SASTFEVFVD EEECTEEEEE KKKNDETISS SSNVLPLNGG REIKKETELL RQNPLRHFPP NSFLR

Arabidopsis Description

BUBR1BUBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VU51]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.