Factsheet for TraesCS6A01G168100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G195800.1	Wheat	cytosol	94.47	95.19
TraesCS6D01G157200.1	Wheat	cytosol, nucleus, plastid	93.72	94.67
HORVU6Hr1G034110.3	Barley	nucleus	78.64	76.34
Os02t0193600-01	Rice	nucleus	71.36	71.36
Zm00001d015863_P001	Maize	cytosol	64.07	65.89
EES04683	Sorghum	cytosol	64.57	63.46
VIT_18s0122g00470.t01	Wine grape	nucleus	49.25	51.44
PGSC0003DMT400025922	Potato	cytosol	48.99	50.39
Solyc04g082900.2.1	Tomato	nucleus	48.49	49.61
KRH49504	Soybean	cytoskeleton, cytosol, nucleus	47.24	48.96
KRG89179	Soybean	cytosol	47.24	48.96
GSMUA_Achr1P16590_001	Banana	nucleus	50.75	47.31
AT2G33560.2	Thale cress	nucleus	45.73	45.96
CDY17186	Canola	nucleus	45.48	45.82
GSMUA_Achr3P11640_001	Banana	endoplasmic reticulum	52.51	45.73
Bra005485.1-P	Field mustard	nucleus	42.96	45.72
CDY27958	Canola	nucleus	44.47	45.5
CDX95868	Canola	cytosol	15.08	41.96
CDY46599	Canola	cytosol	30.9	40.07
CDY23726	Canola	nucleus	25.63	32.59
CDY61325	Canola	cytosol	29.65	31.64
Bra015240.1-P	Field mustard	nucleus	16.33	28.02
TraesCS5A01G142400.1	Wheat	nucleus	16.33	10.48
TraesCS2A01G226000.1	Wheat	plastid	12.81	9.24

Protein Annotations

EnsemblPlants:TraesCS6A01G168100.1	EnsemblPlantsGene:TraesCS6A01G168100	Gene3D:1.25.40.430	GO:GO:0007049	GO:GO:0007094	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:Bub1/Mad3	InterPro:IPR013212	InterPro:Mad3/Bub1_I	PANTHER:PTHR14030
PANTHER:PTHR14030:SF4	PFAM:PF08311	PFscan:PS51489	SEG:seg	SMART:SM00777	MapMan:13.3.5.5.5

Description

No Description!

Coordinates

chr6A:-:172131623..172134579

Molecular Weight (calculated)

45031.8 Da

IEP (calculated)

9.249

GRAVY (calculated)

-0.620

Length

398 amino acids

Sequence
(BLAST)

001: MAAAAARDLA ALDAETLALL GAGPDMAPVA VCGEWETFKE NVRPLKRGRN VGLLNQALKA HTDPAQRAAL LAERGRMIQA IEEYQGEDPL QPWVDCIKWV
101: QESFPAGGEF SGLVVIYEQC VRAFWHDERY KDDLRYLKVW LEYFGLQAGN CSDAEVIFRF LESNQIGEGH AVFYIRYALL MESKNKLKKA DEIFNLGIAR
201: KAKPVEKLET TYRAFLRRST RKKEHEDDTA SDDQPVRKFG NDLNRGETRG QHAENSHLLA KPRVKLQRID VNTPISIYKE NPLPSQGLER ARSKDRAWNT
301: LGTQADRNKE NNMMPARWTS HKIPPKVAAR PAVPPARVSS IEVFIDEECA EEPAPPQVPK SPKPSVLKLR QATSKNLKKE TELLKENPLR NFPLSSLR

Best Arabidopsis Sequence Match ( AT2G33560.1 )
(BLAST)

001: MAAETKVQVS DPEAEFLNSK QETGYEWELF KENVRPLKRG RNVGILNHAL KSHSDHQLRK NLIEKRRNLI EAIDEYEGDD PLSPWIECIK WVQEAFPPGG
101: ECSGLLVIYE QCVRKFWHSE RYKDDLRYLK VWLEYAEHCA DAEVIYKFLE VNEIGKTHAV YYIAYALHIE FKNKVKTANE IFNLGISRDA KPVEKLNDAY
201: KKFMVRTMRR SNTADEEPKE NNDLPSRSFG TLLSRGDNNA RRQALGSSNP QAKKLKPNQS SKTPFAIYAD AVSDTTSGNQ PESDKSRPEF GSWLMLGGRA
301: ERNKENNSLP RKWASFKVPQ KPIVRTVAAA SASTFEVFVD EEECTEEEEE KKKNDETISS SSNVLPLNGG REIKKETELL RQNPLRHFPP NSFLR

Arabidopsis Description

BUBR1BUBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VU51]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.