CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015863_P001	Maize	cytosol	74.57	78.04
TraesCS6D01G157200.1	Wheat	cytosol, nucleus, plastid	62.96	64.72
TraesCS6A01G168100.1	Wheat	nucleus	63.46	64.57
TraesCS6B01G195800.1	Wheat	cytosol	62.47	64.05
Os02t0193600-01	Rice	nucleus	62.22	63.32
HORVU6Hr1G034110.3	Barley	nucleus	55.06	54.39
PGSC0003DMT400025922	Potato	cytosol	47.16	49.35
VIT_18s0122g00470.t01	Wine grape	nucleus	46.42	49.34
KRH49504	Soybean	cytoskeleton, cytosol, nucleus	46.17	48.7
KRG89179	Soybean	cytosol	46.17	48.7
Solyc04g082900.2.1	Tomato	nucleus	46.17	48.07
GSMUA_Achr1P16590_001	Banana	nucleus	50.37	47.78
GSMUA_Achr3P11640_001	Banana	endoplasmic reticulum	53.58	47.48
AT2G33560.2	Thale cress	nucleus	46.17	47.22
CDY27958	Canola	nucleus	45.19	47.04
CDY17186	Canola	nucleus	45.68	46.84
Bra005485.1-P	Field mustard	nucleus	42.96	46.52
CDY46599	Canola	cytosol	31.36	41.37
CDX95868	Canola	cytosol	14.07	39.86
CDY23726	Canola	nucleus	26.67	34.5
CDY61325	Canola	cytosol	31.11	33.78
Bra015240.1-P	Field mustard	nucleus	15.8	27.59
EES09179	Sorghum	nucleus	14.81	9.71
KXG36289	Sorghum	plastid	13.33	8.74
EES16550	Sorghum	mitochondrion, nucleus	14.32	8.1

Protein Annotations

Gene3D:1.25.40.430	MapMan:13.3.5.5.5	EntrezGene:8071620	InterPro:Bub1/Mad3	UniProt:C5XXE9	ncoils:Coil
EnsemblPlants:EES04683	ProteinID:EES04683	ProteinID:EES04683.1	GO:GO:0000003	GO:GO:0000778	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0006468	GO:GO:0007049	GO:GO:0007094	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016043	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0051754
InterPro:IPR013212	InterPro:Mad3/Bub1_I	PFAM:PF08311	PFscan:PS51489	PANTHER:PTHR14030	PANTHER:PTHR14030:SF4
SMART:SM00777	EnsemblPlantsGene:SORBI_3004G077100	UniParc:UPI0001A85748	RefSeq:XP_002451707.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:+:6370984..6373917

Molecular Weight (calculated)

45700.3 Da

IEP (calculated)

9.501

GRAVY (calculated)

-0.706

Length

405 amino acids

Sequence
(BLAST)

001: MAAAAAAATA KAAEEMVEVL DEETLALMGV SSAATAAPVA VGAEWETFKE NVRPLKRGRD VSKLNHALKA HADPAQRAAL LETRKKMIEA IDQYQGEDPL
101: QPWLDCIKWV QESFPTGGEC SGLVVLYEQC VRTFWHDGRY KDDLRFLKVW LEYAGNCADA EVIYRFLEAN QIGQGHAIYY MAYASLMESK NKLRKAKEIF
201: DLGIARKAKP LEKLEAVYRT FLRRSTKRRE QEPDNTADDD LPNRSFGTNL KRDENRNHQA GNSGLGRPRA LQRIDPNRPL SIYKDERPLL NQGLDGVRNR
301: ENNTSWRTLP TQADRNKENS MMPAKWTSHK IPQKLGARGA VQSTRTSSIE VFVEEDTAQE PAQPVPKTPN PSVLKLRQAT SKSLKKETEL LKENPLRNFP
401: LSSLR

Best Arabidopsis Sequence Match ( AT2G33560.2 )
(BLAST)

001: MAAETKVQVS DPEAEFLNSK QETGYEWELF KENVRPLKRG RNVGILNHAL KSHSDHQLRK NLIEKRRNLI EAIDEYEGDD PLSPWIECIK WVQEAFPPGG
101: ECSGLLVIYE QCVRKFWHSE RYKDDLRYLK VWLEYAEHCA DAEVIYKFLE VNEIGKTHAV YYIAYALHIE FKNKVKTANE IFNLGISRDA KPVEKLNDAY
201: KKFMVRTMRR SNTADEQEPK ENNDLPSRSF GTLLSRGDNN ARRQALGSSN PQAKKLKPNQ SSKTPFAIYA DAVSDTTSGN QPESDKSRPE FGSWLMLGGR
301: AERNKENNSL PRKWASFKVP QKPIVRTVAA ASASTFEVFV DEEECTEEEE EKKKNDETIS SSSNVLPLNG GREIKKETEL LRQNPLRHFP PNSFLR

Arabidopsis Description

BUBR1BUBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VU51]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.