Factsheet for HORVU6Hr1G034110.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G168100.1	Wheat	nucleus	76.34	78.64
TraesCS6B01G195800.1	Wheat	cytosol	74.15	76.96
TraesCS6D01G157200.1	Wheat	cytosol, nucleus, plastid	73.41	76.4
Os02t0193600-01	Rice	nucleus	58.78	60.55
Zm00001d015863_P001	Maize	cytosol	54.39	57.62
EES04683	Sorghum	cytosol	54.39	55.06
VIT_18s0122g00470.t01	Wine grape	nucleus	40.73	43.83
PGSC0003DMT400025922	Potato	cytosol	40.49	42.89
GSMUA_Achr1P16590_001	Banana	nucleus	44.39	42.62
Solyc04g082900.2.1	Tomato	nucleus	40.24	42.42
KRH49504	Soybean	cytoskeleton, cytosol, nucleus	38.78	41.41
KRG89179	Soybean	cytosol	38.54	41.15
GSMUA_Achr3P11640_001	Banana	endoplasmic reticulum	45.12	40.48
CDX95868	Canola	cytosol	13.9	39.86
CDY17186	Canola	nucleus	38.05	39.49
AT2G33560.2	Thale cress	nucleus	37.8	39.14
CDY46599	Canola	cytosol	29.27	39.09
CDY27958	Canola	nucleus	36.83	38.82
Bra005485.1-P	Field mustard	nucleus	35.12	38.5
CDY61325	Canola	cytosol	28.29	31.1
Bra015240.1-P	Field mustard	nucleus	15.12	26.72
CDY23726	Canola	nucleus	19.76	25.88
HORVU0Hr1G039990.19	Barley	cytosol, nucleus	8.29	11.33
HORVU5Hr1G045460.1	Barley	mitochondrion	15.37	9.74
HORVU7Hr1G029580.3	Barley	nucleus	14.63	9.66

Protein Annotations

EnsemblPlants:HORVU6Hr1G034110.3	EnsemblPlantsGene:HORVU6Hr1G034110	Gene3D:1.25.40.430	GO:GO:0007049	GO:GO:0007094	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:Bub1/Mad3	InterPro:IPR013212	InterPro:Mad3/Bub1_I	PANTHER:PTHR14030
PANTHER:PTHR14030:SF4	PFAM:PF08311	PFscan:PS51489	SEG:seg	SMART:SM00777	UniParc:UPI000B4830F7
UniProt:A0A287TW09	MapMan:13.3.5.5.5	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:158174725..158177573

Molecular Weight (calculated)

46338.9 Da

IEP (calculated)

10.318

GRAVY (calculated)

-0.907

Length

410 amino acids

Sequence
(BLAST)

001: DEFESYPSPN GRLRSGTHGG GGRPSGARRG DSGAAGGRAR YGAGGRVRRV GDLQGERAAA ETRAERRPPQ PGPQGARRPR PACRPPRRTQ RRMIEAIDEY
101: QGEDPLQPWV DCIKWVQESF PAGGEFSGLV VIYEQCVRAF WHDERYKDDL RYLKVWLEYA GNCSDAEVIF RFLESNQIGE GHAVFYIRYA LLMESKNKLK
201: KADEIFVLGI ARKAKPVEKL ETTYRAFLRR STKKKGHEDD TASDNQPIRK FGSDLNRGDT RGQHAENSHL LAKPRVTLQR FDFNTQISIY KENPLPSQGL
301: ERARSKDKTW NTLGTQADRN KENNMMPARW TSHKIPPKVA ARPAVPPARV SSIEVFIDDE CAEEPAPPQV PKSPKPSVLK LRQATSKNLK KETELLKENP
401: LRNFPLSSLR

Best Arabidopsis Sequence Match ( AT2G33560.1 )
(BLAST)

001: MAAETKVQVS DPEAEFLNSK QETGYEWELF KENVRPLKRG RNVGILNHAL KSHSDHQLRK NLIEKRRNLI EAIDEYEGDD PLSPWIECIK WVQEAFPPGG
101: ECSGLLVIYE QCVRKFWHSE RYKDDLRYLK VWLEYAEHCA DAEVIYKFLE VNEIGKTHAV YYIAYALHIE FKNKVKTANE IFNLGISRDA KPVEKLNDAY
201: KKFMVRTMRR SNTADEEPKE NNDLPSRSFG TLLSRGDNNA RRQALGSSNP QAKKLKPNQS SKTPFAIYAD AVSDTTSGNQ PESDKSRPEF GSWLMLGGRA
301: ERNKENNSLP RKWASFKVPQ KPIVRTVAAA SASTFEVFVD EEECTEEEEE KKKNDETISS SSNVLPLNGG REIKKETELL RQNPLRHFPP NSFLR

Arabidopsis Description

BUBR1BUBR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VU51]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.